RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 ZNF583Q96ND8 569 aa14.97□□□□□ -0.01
SSBP1-207ENST00000468267 ZNF317Q96PQ6 595 aaPredicted RBP14.97□□□□□ -0.01
SSBP1-207ENST00000468267 GID8Q9NWU2 228 aa14.97□□□□□ -0.01
SSBP1-207ENST00000468267 CAPN7Q9Y6W3 813 aa14.97□□□□□ -0.01
SSBP1-207ENST00000468267 CPSF4LA6NMK7 179 aaKnown RBP14.96□□□□□ -0.01
SSBP1-207ENST00000468267 CHP2O43745 196 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 SLC43A1O75387 559 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 WNT11O96014 354 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 HPRP00739 348 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 CD8AP01732 235 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 VEZF1Q14119 521 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 HIKESHIQ53FT3 197 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 SLC22A25Q6T423 547 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 KLHL24Q6TFL4 600 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 DTX2Q86UW9 622 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 ANKK1Q8NFD2 765 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 OR1K1Q8NGR3 316 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 VANGL1Q8TAA9 524 aaPredicted RBP14.96□□□□□ -0.01
SSBP1-207ENST00000468267 BCL2L2Q92843 193 aaPredicted RBP14.96□□□□□ -0.01
SSBP1-207ENST00000468267 MOGAT1Q96PD6 335 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 ALKBH3Q96Q83 286 aaPredicted RBP14.96□□□□□ -0.01
SSBP1-207ENST00000468267 BDH2Q9BUT1 245 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 TRAF4Q9BUZ4 470 aaPredicted RBP14.96□□□□□ -0.01
SSBP1-207ENST00000468267 ASPNQ9BXN1 380 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 GRIP2Q9C0E4 1043 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 PCDHAC1Q9H158 963 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 FAIMQ9NVQ4 179 aa14.96□□□□□ -0.01
SSBP1-207ENST00000468267 MRPL39Q9NYK5 338 aaKnown RBP14.96□□□□□ -0.01
SSBP1-207ENST00000468267 TRAPPC13A5PLN9 417 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 E7EQL1 145 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 RPL36A-HNRNPH2H7BZ11 118 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 H7C1Q1 480 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 ATP8B1O43520 1251 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 TRAF3IP2O43734 574 aaPredicted RBP14.95□□□□□ -0.02
SSBP1-207ENST00000468267 THY1P04216 161 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 NQO1P15559 274 aaKnown RBP14.95□□□□□ -0.02
SSBP1-207ENST00000468267 PTNP21246 168 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 IL1RL1Q01638 556 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 ROR2Q01974 943 aaKnown RBP14.95□□□□□ -0.02
SSBP1-207ENST00000468267 SPOCK1Q08629 439 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 PMS2P3Q13401 168 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 TBRG1Q3YBR2 411 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 HMBOX1Q6NT76 420 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 ERICH5Q6P6B1 374 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 NHLRC1Q6VVB1 395 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 WDR88Q6ZMY6 472 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 TSPYL5Q86VY4 417 aaPredicted RBP14.95□□□□□ -0.02
SSBP1-207ENST00000468267 UEVLDQ8IX04 471 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 DEPDC4Q8N2C3 294 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 CIARTQ8N365 385 aaPredicted RBP14.95□□□□□ -0.02
SSBP1-207ENST00000468267 C10orf53Q8N6V4 93 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 ADAMTS16Q8TE57 1224 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 GTPBP3Q969Y2 492 aaKnown RBP14.95□□□□□ -0.02
SSBP1-207ENST00000468267 TRMT61AQ96FX7 289 aaKnown RBP14.95□□□□□ -0.02
SSBP1-207ENST00000468267 COX4I2Q96KJ9 171 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 OR2M2Q96R28 347 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 SMR3AQ99954 134 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 OBP2BQ9NPH6 170 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 ARMCX1Q9P291 453 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 USP22Q9UPT9 525 aa14.95□□□□□ -0.02
SSBP1-207ENST00000468267 TRIM64A6NGJ6 449 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 TRIM64BA6NI03 449 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 LRRN3E7EW58 273 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 PLPP3O14495 311 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 AKAP8O43823 692 aaKnown RBP14.94□□□□□ -0.02
SSBP1-207ENST00000468267 MT-ATP6P00846 226 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 HLA-DOBP13765 273 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 PAX7P23759 505 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 CDKN1AP38936 164 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 SH3BGRP55822 239 aaPredicted RBP14.94□□□□□ -0.02
SSBP1-207ENST00000468267 AGAP6Q5VW22 663 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 ANKRD16Q6P6B7 361 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 TMEM123Q8N131 208 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 GPR137CQ8N3F9 429 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 MAGEE2Q8TD90 523 aaPredicted RBP14.94□□□□□ -0.02
SSBP1-207ENST00000468267 PROX1Q92786 737 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 DHRS9Q9BPW9 319 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 ALG2Q9H553 416 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 GPR35Q9HC97 309 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 POU2F3Q9UKI9 436 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 SLC7A7Q9UM01 511 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 NOX1Q9Y5S8 564 aa14.94□□□□□ -0.02
SSBP1-207ENST00000468267 ARFGEF3Q5TH69 2177 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 ARPC4-TTLL3A0A0A6YYG9 625 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 HOXB1P14653 301 aaPredicted RBP14.93□□□□□ -0.02
SSBP1-207ENST00000468267 TTKP33981 857 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 ARF1P84077 181 aaKnown RBP14.93□□□□□ -0.02
SSBP1-207ENST00000468267 PUDPQ08623 228 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 TTC33Q6PID6 262 aaPredicted RBP14.93□□□□□ -0.02
SSBP1-207ENST00000468267 B3GLCTQ6Y288 498 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 PXKQ7Z7A4 578 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 CARM1Q86X55 608 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 POU5F2Q8N7G0 328 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 PIK3C3Q8NEB9 887 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 OR5J2Q8NH18 312 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 RP9Q8TA86 221 aaKnown RBP14.93□□□□□ -0.02
SSBP1-207ENST00000468267 RCN3Q96D15 328 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 MPP4Q96JB8 637 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 ZNF426Q9BUY5 554 aa14.93□□□□□ -0.02
SSBP1-207ENST00000468267 NELFAQ9H3P2 528 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms