RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 OR4A8P0C604 315 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 SH3BGRP55822 239 aaPredicted RBP21.25■□□□□ 0.99
PTCH1-210ENST00000468211 SNRPD2P62316 118 aaKnown RBP21.25■□□□□ 0.99
PTCH1-210ENST00000468211 CEACAM16Q2WEN9 425 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 ALG10BQ5I7T1 473 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 WDFY1Q8IWB7 410 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 TMEM123Q8N131 208 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 SLC38A4Q969I6 547 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 ZNF317Q96PQ6 595 aaPredicted RBP21.25■□□□□ 0.99
PTCH1-210ENST00000468211 OR2M2Q96R28 347 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 VRK1Q99986 396 aaPredicted RBP21.25■□□□□ 0.99
PTCH1-210ENST00000468211 KCNS3Q9BQ31 491 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 CRLF2Q9HC73 371 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 GMEB1Q9Y692 573 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 TRAV36DV7A0A075B6V5 113 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 RNF212BA8MTL3 300 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 MS4A18H0YCH9 400 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 OR2T1O43869 369 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 ERLIN1O75477 346 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 TGDSO95455 350 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 IFNA2P01563 188 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 HLA-DOBP13765 273 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 PDLIM4P50479 330 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 LSM11P83369 360 aaKnown RBP eCLIP21.24■□□□□ 0.99
PTCH1-210ENST00000468211 C1DQ13901 141 aaKnown RBP21.24■□□□□ 0.99
PTCH1-210ENST00000468211 GGTLC2Q14390 218 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 ADRM1Q16186 407 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 MS4A18Q3C1V0 323 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 C3orf36Q3SXR2 165 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 AGBL2Q5U5Z8 902 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 CYB5R2Q6BCY4 276 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 H1FNTQ75WM6 255 aaPredicted RBP21.24■□□□□ 0.99
PTCH1-210ENST00000468211 SLC46A3Q7Z3Q1 461 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 PHC2Q8IXK0 858 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 ARIH2OSQ8N7S6 290 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 FAM169BQ8N8A8 192 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 FOXN4Q96NZ1 517 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 CCDC28BQ9BUN5 200 aa21.24■□□□□ 0.99
PTCH1-210ENST00000468211 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.23■□□□□ 0.99
PTCH1-210ENST00000468211 B9A039 149 aa21.23■□□□□ 0.99
PTCH1-210ENST00000468211 FAM157CP0CG43 387 aa21.23■□□□□ 0.99
PTCH1-210ENST00000468211 HOXB1P14653 301 aaPredicted RBP21.23■□□□□ 0.99
PTCH1-210ENST00000468211 CBR1P16152 277 aa21.23■□□□□ 0.99
PTCH1-210ENST00000468211 AQP1P29972 269 aa21.23■□□□□ 0.99
PTCH1-210ENST00000468211 IDH3GP51553 393 aaPredicted RBP21.23■□□□□ 0.99
PTCH1-210ENST00000468211 AQP5P55064 265 aa21.23■□□□□ 0.99
PTCH1-210ENST00000468211 SCARB2Q14108 478 aa21.23■□□□□ 0.99
PTCH1-210ENST00000468211 GPR137CQ8N3F9 429 aa21.23■□□□□ 0.99
PTCH1-210ENST00000468211 ANKK1Q8NFD2 765 aa21.23■□□□□ 0.99
PTCH1-210ENST00000468211 LRRC8CQ8TDW0 803 aa21.23■□□□□ 0.99
PTCH1-210ENST00000468211 DNAJA4Q8WW22 397 aaPredicted RBP21.23■□□□□ 0.99
PTCH1-210ENST00000468211 PLK3Q9H4B4 646 aa21.23■□□□□ 0.99
PTCH1-210ENST00000468211 FKBP7Q9Y680 259 aa21.23■□□□□ 0.99
PTCH1-210ENST00000468211 LOC102725191A0A1B0GVB3 256 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 BGLAPP02818 100 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 GPX2P18283 190 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 PAX7P23759 505 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 THBS4P35443 961 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 NR4A2P43354 598 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 IL1RL1Q01638 556 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 EFNB3Q15768 340 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 AGKQ53H12 422 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 CARD17Q5XLA6 110 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 ULK3Q6PHR2 472 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 C5orf46Q6UWT4 87 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 NHLRC1Q6VVB1 395 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 KRT73Q86Y46 540 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 SLC41A3Q96GZ6 507 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 EMC6Q9BV81 110 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 TMEM38AQ9H6F2 299 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 CDC42EP3Q9UKI2 254 aa21.22■□□□□ 0.99
PTCH1-210ENST00000468211 A0A087WUJ7 227 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 IGHV2OR16-5A0A0B4J2B6 119 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 A0A0B4J2E0 115 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 IGHV4-61A0A0C4DH41 118 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 A0A1B0GX12 115 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 LRRN3E7EW58 273 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 M0R3G1 203 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 PDE5AO76074 875 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 PPIBP23284 216 aaKnown RBP21.21■□□□□ 0.99
PTCH1-210ENST00000468211 RGS8P57771 180 aaPredicted RBP21.21■□□□□ 0.99
PTCH1-210ENST00000468211 OR1Q1Q15612 314 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 CARTPTQ16568 116 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 FAM91A1Q658Y4 838 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 DLEU7Q6UYE1 221 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 NET1Q7Z628 596 aaPredicted RBP21.21■□□□□ 0.99
PTCH1-210ENST00000468211 MDP1Q86V88 176 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 ADPRHL1Q8NDY3 354 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 PIK3C3Q8NEB9 887 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 OR4F15Q8NGB8 312 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 RNF217Q8TC41 542 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 SLC47A1Q96FL8 570 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 TXNDC15Q96J42 360 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 MOGAT1Q96PD6 335 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 CPPED1Q9BRF8 314 aaPredicted RBP21.21■□□□□ 0.99
PTCH1-210ENST00000468211 SPATA5L1Q9BVQ7 753 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 TMEM160Q9NX00 188 aa21.21■□□□□ 0.99
PTCH1-210ENST00000468211 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.21■□□□□ 0.99
PTCH1-210ENST00000468211 TESQ9UGI8 421 aaKnown RBP21.21■□□□□ 0.99
PTCH1-210ENST00000468211 SLC35F4A4IF30 521 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms