RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CLEC4AQ9UMR7 237 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 SIGLEC7Q9Y286 467 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 UNC119BA6NIH7 251 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 NPIPB13A6NJU9 1138 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 NPIPB4C9JG80 1138 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 BLOC1S5-TXNDC5H3BN57 136 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 ZG16O60844 167 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 PTP4A3O75365 173 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 AGFG2O95081 481 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 HPRP00739 348 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 ADAP00813 363 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 CGAP01215 116 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 IST1P53990 364 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 RPL18Q07020 188 aaKnown RBP14.21□□□□□ -0.13
GPC1-207ENST00000466624 TAF11Q15544 211 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 SLC25A35Q3KQZ1 300 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 HMBOX1Q6NT76 420 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 CD300LDQ6UXZ3 194 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 NHLRC1Q6VVB1 395 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 ZNF771Q7L3S4 317 aaPredicted RBP14.21□□□□□ -0.13
GPC1-207ENST00000466624 MRGPRGQ86SM5 289 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 HIPK1Q86Z02 1210 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 EPHX4Q8IUS5 362 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 UEVLDQ8IX04 471 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 SVOPLQ8N434 492 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 CNEP1R1Q8N9A8 125 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 ZIC4Q8N9L1 334 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 OR13C2Q8NGS9 318 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 LILRB4Q8NHJ6 448 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 ITLN2Q8WWU7 325 aaPredicted RBP14.21□□□□□ -0.13
GPC1-207ENST00000466624 STARD4Q96DR4 205 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 GPA33Q99795 319 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 NDEL1Q9GZM8 345 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 PLSCR4Q9NRQ2 329 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 PARPBPQ9NWS1 579 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 RCE1Q9Y256 329 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 NOSIPQ9Y314 301 aaKnown RBP14.21□□□□□ -0.13
GPC1-207ENST00000466624 FLNCQ14315 2725 aa14.21□□□□□ -0.13
GPC1-207ENST00000466624 HELZ2Q9BYK8 2649 aaKnown RBP14.2□□□□□ -0.14
GPC1-207ENST00000466624 RNF13O43567 381 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 TRAF3IP2O43734 574 aaPredicted RBP14.2□□□□□ -0.14
GPC1-207ENST00000466624 AKAP8O43823 692 aaKnown RBP14.2□□□□□ -0.14
GPC1-207ENST00000466624 GASTP01350 101 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 ANXA8P13928 327 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 GSTM3P21266 225 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 BMP5P22003 454 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 AHCYP23526 432 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 AQP2P41181 271 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 SIRPAP78324 504 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 POU3F1Q03052 451 aaPredicted RBP14.2□□□□□ -0.14
GPC1-207ENST00000466624 C1DQ13901 141 aaKnown RBP14.2□□□□□ -0.14
GPC1-207ENST00000466624 LAPTM4AQ15012 233 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 ALG10Q5BKT4 473 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 VWA1Q6PCB0 445 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 AMIGO2Q86SJ2 522 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 MEX3DQ86XN8 651 aaKnown RBP14.2□□□□□ -0.14
GPC1-207ENST00000466624 LIX1LQ8IVB5 337 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 KDM8Q8N371 416 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 AQP11Q8NBQ7 271 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 OR51A7Q8NH64 312 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 SSC4DQ8WTU2 575 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 DNAJC9Q8WXX5 260 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 ZNF385AQ96PM9 386 aaKnown RBP14.2□□□□□ -0.14
GPC1-207ENST00000466624 TNFRSF13CQ96RJ3 184 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 MCCC2Q9HCC0 563 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 INIPQ9NRY2 104 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 JKAMPQ9P055 326 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 PDP1Q9P0J1 537 aaPredicted RBP14.2□□□□□ -0.14
GPC1-207ENST00000466624 PROCRQ9UNN8 238 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 FREM1Q5H8C1 2179 aa14.2□□□□□ -0.14
GPC1-207ENST00000466624 CACNA1CQ13936 2221 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 USP9XQ93008 2570 aaPredicted RBP14.19□□□□□ -0.14
GPC1-207ENST00000466624 TRAV27A0A087WT01 109 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 MSTNO14793 375 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 MRPL33O75394 65 aaKnown RBP14.19□□□□□ -0.14
GPC1-207ENST00000466624 NDUFB2O95178 105 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 CLDN14O95500 239 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 CNOT4O95628 575 aaKnown RBP14.19□□□□□ -0.14
GPC1-207ENST00000466624 HLA-DOBP13765 273 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 OR3A2P47893 321 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 ELF3P78545 371 aaPredicted RBP14.19□□□□□ -0.14
GPC1-207ENST00000466624 IL1RL1Q01638 556 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 COX10Q12887 443 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 RPL13AP3Q6NVV1 102 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 RASSF6Q6ZTQ3 369 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 NUFIP2Q7Z417 695 aaKnown RBP14.19□□□□□ -0.14
GPC1-207ENST00000466624 BTLAQ7Z6A9 289 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 ZDHHC13Q8IUH4 622 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 CLDN22Q8N7P3 220 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 LRRC75AQ8NAA5 344 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 RELL2Q8NC24 303 aaPredicted RBP14.19□□□□□ -0.14
GPC1-207ENST00000466624 MOSPD2Q8NHP6 518 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 CA5BP1Q8WTZ4 195 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 ADAD1Q96M93 576 aaKnown RBP14.19□□□□□ -0.14
GPC1-207ENST00000466624 GPX7Q96SL4 187 aaPredicted RBP14.19□□□□□ -0.14
GPC1-207ENST00000466624 FEVQ99581 238 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 PKP2Q99959 881 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 OSBPL10Q9BXB5 764 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 GABARAPL1Q9H0R8 117 aa14.19□□□□□ -0.14
GPC1-207ENST00000466624 DOPEY1Q5JWR5 2465 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms