RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ZNF23P17027 643 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 GRPRP30550 384 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 PPOXP50336 477 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 TRIP10Q15642 601 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 NFKBIDQ8NI38 313 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 C1orf159Q96HA4 380 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 MS4A3Q96HJ5 214 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 ITCHQ96J02 903 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 KCNS3Q9BQ31 491 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 RCE1Q9Y256 329 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 LOC390937A0A1W2PQ73 354 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 LRRN3E7EW58 273 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 RPL36A-HNRNPH2H7BZ11 118 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 NDUFS8O00217 210 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 PDE5AO76074 875 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 STAMBPO95630 424 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 BMP2P12643 396 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 ZSWIM7Q19AV6 140 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 CARD17Q5XLA6 110 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 NUP37Q8NFH4 326 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 DOK1Q99704 481 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 EMC6Q9BV81 110 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 TPK1Q9H3S4 243 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 CRLF2Q9HC73 371 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 BCL2L10Q9HD36 194 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 KLHL14Q9P2G3 628 aa17.81■□□□□ 0.44
COL6A1-203ENST00000466285 A0A096LPI6 279 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 CLIC1O00299 241 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 TPST2O60704 377 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 LILRA1O75019 489 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 CBR1P16152 277 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 ZNF43P17038 809 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 CR1LQ2VPA4 569 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 IQCCQ4KMZ1 466 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 KRT80Q6KB66 452 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 MSANTD1Q6ZTZ1 278 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 SPATA21Q7Z572 469 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 FUNDC1Q8IVP5 155 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 ZNF442Q9H7R0 627 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 ZNF224Q9NZL3 707 aa17.8■□□□□ 0.44
COL6A1-203ENST00000466285 SH3PXD2BA1X283 911 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 M0R3G1 203 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 UBDO15205 165 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 SLC43A1O75387 559 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 TGFAP01135 160 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 HLA-HP01893 362 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 ARAFP10398 606 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 DAOP14920 347 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 SH3BGRP55822 239 aaPredicted RBP17.79■□□□□ 0.44
COL6A1-203ENST00000466285 SNTB2Q13425 540 aaKnown RBP17.79■□□□□ 0.44
COL6A1-203ENST00000466285 C3orf36Q3SXR2 165 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 PAGE3Q5JUK9 113 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 C1QTNF12Q5T7M4 302 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 NHLRC1Q6VVB1 395 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 BBS10Q8TAM1 723 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 TXNDC15Q96J42 360 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 ZNF75AQ96N20 296 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 OXGR1Q96P68 337 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 MOGAT1Q96PD6 335 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 SNX18Q96RF0 628 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 RMND5AQ9H871 391 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 SLC52A3Q9NQ40 469 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 MED29Q9NX70 200 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 IFT52Q9Y366 437 aa17.79■□□□□ 0.44
COL6A1-203ENST00000466285 OR6C65A6NJZ3 312 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 MS4A18H0YCH9 400 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 BGLAPP02818 100 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 NPR2P20594 1047 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 GTF2E2P29084 291 aaKnown RBP17.78■□□□□ 0.44
COL6A1-203ENST00000466285 AQP5P55064 265 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 MAGOHP61326 146 aaKnown RBP17.78■□□□□ 0.44
COL6A1-203ENST00000466285 MS4A18Q3C1V0 323 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 CARM1Q86X55 608 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 MIER2Q8N344 545 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 GPR137CQ8N3F9 429 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 TLCD1Q96CP7 247 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 EBF4Q9BQW3 602 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 B3GNT2Q9NY97 397 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 MYEF2Q9P2K5 600 aaKnown RBP17.78■□□□□ 0.44
COL6A1-203ENST00000466285 ZNF232Q9UNY5 417 aa17.78■□□□□ 0.44
COL6A1-203ENST00000466285 TRBV5-3A0A0A0MS03 114 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 AIM2O14862 343 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 GIFP27352 417 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 AQP1P29972 269 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 CAPZA2P47755 286 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 IL1RL1Q01638 556 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 CCNIQ14094 377 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 ADRM1Q16186 407 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 FAM69AQ5T7M9 428 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 FAM169BQ8N8A8 192 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 OR4F15Q8NGB8 312 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 ZNF317Q96PQ6 595 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-203ENST00000466285 MRPL37Q9BZE1 423 aaKnown RBP17.77■□□□□ 0.44
COL6A1-203ENST00000466285 VAPAQ9P0L0 249 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 USH1CQ9Y6N9 552 aa17.77■□□□□ 0.44
COL6A1-203ENST00000466285 TENM1Q9UKZ4 2725 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 TRAV36DV7A0A075B6V5 113 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 ZNF99A8MXY4 864 aaPredicted RBP17.76■□□□□ 0.43
COL6A1-203ENST00000466285 ADRA2AP08913 450 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 TACSTD2P09758 323 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms