RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 NTF4P34130 210 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 OR1E2P47887 323 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 MAP2K6P52564 334 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 CRYBA2P53672 197 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 AQP4P55087 323 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 FOXG1P55316 489 aaPredicted RBP8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 TUBA4AP68366 448 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 LIPEQ05469 1076 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 FAPQ12884 760 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 DAZAP2Q15038 168 aaPredicted RBP8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 NRF1Q16656 503 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 SFRP5Q5T4F7 317 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 KRT80Q6KB66 452 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 NIPAL3Q6P499 406 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 ULK3Q6PHR2 472 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 BHLHA15Q7RTS1 189 aaPredicted RBP8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 GABRG1Q8N1C3 465 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 RNF148Q8N7C7 305 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 LSMEM1Q8N8F7 131 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 OR9K2Q8NGE7 335 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 ZNF417Q8TAU3 575 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 ADAMTS16Q8TE57 1224 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 DNAJA4Q8WW22 397 aaPredicted RBP8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 TAAR8Q969N4 342 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 ZNF587Q96SQ5 575 aaPredicted RBP8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 PTDSS2Q9BVG9 487 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 YTHDF1Q9BYJ9 559 aaKnown RBP8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 UBTD1Q9HAC8 227 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 PAPOLBQ9NRJ5 636 aaKnown RBP8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 CCM2LQ9NUG4 571 aaPredicted RBP8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 MAGEL2Q9UJ55 1249 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 SLC7A7Q9UM01 511 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 SLC9A8Q9Y2E8 581 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 GPR52Q9Y2T5 361 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 SNX13Q9Y5W8 968 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 RAI1Q7Z5J4 1906 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 NAV2Q8IVL1 2488 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 TRAV36DV7A0A075B6V5 113 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 IGKV3D-15A0A087WSY6 115 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 A0A087WUJ7 227 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 DEFB108AA8MXU0 73 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 CHP2O43745 196 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 KRT33AO76009 404 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 ZNF682O95780 498 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 NCK1P16333 377 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 PSMB1P20618 241 aaKnown RBP8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 CRYGSP22914 178 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 YAP1P46937 504 aaKnown RBP8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 SLC16A1P53985 500 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 NR1H2P55055 460 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 CLDN17P56750 224 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 TAS2R41P59536 307 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 H3F3AP84243 136 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 PRR20EP86478 221 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 PRR20CP86479 221 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 PRR20DP86480 221 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 PRR20BP86481 221 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 PRR20AP86496 221 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 LGALS3BPQ08380 585 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 ITGADQ13349 1161 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 VEZF1Q14119 521 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 SLC17A1Q14916 467 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 TAB1Q15750 504 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 CYBRD1Q53TN4 286 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 FAM69AQ5T7M9 428 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 TSPO2Q5TGU0 170 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 FBXW9Q5XUX1 488 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 LPCAT4Q643R3 524 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 Q6ZT83 130 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 CCDC80Q76M96 950 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 AAED1Q7RTV5 226 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 TSPYL5Q86VY4 417 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 SLC15A3Q8IY34 581 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 STEAP2Q8NFT2 490 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 OR52N5Q8NH56 324 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 MFSD8Q8NHS3 518 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 RASSF5Q8WWW0 418 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 FAM162AQ96A26 154 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 DGCR14Q96DF8 476 aaKnown RBP8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 PLPPR2Q96GM1 343 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 RDH12Q96NR8 316 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 ALKBH3Q96Q83 286 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 SH3GL3Q99963 347 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 KCTD14Q9BQ13 255 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 YIPF3Q9GZM5 350 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 C12orf10Q9HB07 376 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 SLC7A10Q9NS82 523 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 ASB6Q9NWX5 421 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 EGFL7Q9UHF1 273 aa8.6□□□□□ -1.03
RTFDC1-205ENST00000466260 DSCAMO60469 2012 aa8.59□□□□□ -1.03
RTFDC1-205ENST00000466260 ANKHD1Q8IWZ3 2542 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-205ENST00000466260 DHRS12A0PJE2 317 aa8.59□□□□□ -1.03
RTFDC1-205ENST00000466260 FAM221AA4D161 298 aa8.59□□□□□ -1.03
RTFDC1-205ENST00000466260 FTCDNL1E5RQL4 147 aa8.59□□□□□ -1.03
RTFDC1-205ENST00000466260 C11orf98E9PRG8 122 aa8.59□□□□□ -1.03
RTFDC1-205ENST00000466260 CXCR6O00574 342 aa8.59□□□□□ -1.03
RTFDC1-205ENST00000466260 CLOCKO15516 846 aa8.59□□□□□ -1.03
RTFDC1-205ENST00000466260 NPIPB7O75200 414 aa8.59□□□□□ -1.03
RTFDC1-205ENST00000466260 PLAUP00749 431 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms