RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 GPN3Q9UHW5 284 aaPredicted RBP18.05■□□□□ 0.48
SDF4-205ENST00000465727 ENTPD2Q9Y5L3 495 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 IER3IP1Q9Y5U9 82 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 TRAV14DV4A0A0A6YYC5 116 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 A0A1B0GWA3 101 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 RAB19A4D1S5 217 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 SNRNP200O75643 2136 aaKnown RBP18.05■□□□□ 0.48
SDF4-205ENST00000465727 PCCBP05166 539 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 AK4P27144 223 aaPredicted RBP18.05■□□□□ 0.48
SDF4-205ENST00000465727 UBE2MP61081 183 aaKnown RBP18.05■□□□□ 0.48
SDF4-205ENST00000465727 ISXQ2M1V0 245 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 HFEQ30201 348 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 LPCAT3Q6P1A2 487 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 RAB11FIP2Q7L804 512 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 LRRTM1Q86UE6 522 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 SEMA4CQ9C0C4 833 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 EXO5Q9H790 373 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 HCFC1R1Q9NWW0 138 aa18.05■□□□□ 0.48
SDF4-205ENST00000465727 GOLGA4Q13439 2230 aaKnown RBP18.05■□□□□ 0.48
SDF4-205ENST00000465727 TRBV5-5A0A0J9YX44 114 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 GGT3PA6NGU5 568 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 OR5K4A6NMS3 321 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 ANXA2P07355 339 aaKnown RBP18.04■□□□□ 0.48
SDF4-205ENST00000465727 SPI1P17947 270 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 ADRA2CP18825 462 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 CFPP27918 469 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 FHL5Q5TD97 284 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 ZNF425Q6IV72 752 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 DPY19L2P2Q6ZN68 376 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 TMPRSS12Q86WS5 348 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 SVBPQ8N300 66 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 OR51S1Q8NGJ8 323 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 OR5AK2Q8NH90 309 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 RAB7BQ96AH8 199 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 UQCC2Q9BRT2 126 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 SLC19A3Q9BZV2 496 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 TRIM2Q9C040 744 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 STEAP1Q9UHE8 339 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 SLC27A6Q9Y2P4 619 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 HTTP42858 3142 aa18.04■□□□□ 0.48
SDF4-205ENST00000465727 A0A087WV62 115 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 BCL2L11O43521 198 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 BRINP1O60477 761 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 ZNF432O94892 652 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 ITGB2P05107 769 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 NGFRP08138 427 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 TMIGD3P0DMS9 266 aaPredicted RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 GTF2F2P13984 249 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 CPMP14384 443 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 TLX1P31314 330 aaPredicted RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 ERVK-25P63136 954 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 SRSF4Q08170 494 aaKnown RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 FNDC3BQ53EP0 1204 aaKnown RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 ELP2Q6IA86 826 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 JMJD6Q6NYC1 403 aaPredicted RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 FAM220AQ7Z4H9 259 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 DEFB128Q7Z7B8 93 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 NPEPL1Q8NDH3 523 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 OR52E1Q8NGJ3 308 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 RNF166Q96A37 237 aaPredicted RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 C12orf57Q99622 126 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 USB1Q9BQ65 265 aaKnown RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 NMNAT2Q9BZQ4 307 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 TSPAN10Q9H1Z9 355 aaPredicted RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 MYOZ1Q9NP98 299 aaPredicted RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 FLRT3Q9NZU0 649 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 TP53BP1Q12888 1972 aaPredicted RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 PQLC2LA1A4F0 135 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 ARPC3O15145 178 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 ACHEP22303 614 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 PLAURQ03405 335 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 ALG10BQ5I7T1 473 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 ANKRD33Q7Z3H0 272 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 LSRQ86X29 649 aaPredicted RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 BEST3Q8N1M1 668 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 C12orf45Q8N5I9 185 aaPredicted RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 OR4D10Q8NGI6 311 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 ZNF417Q8TAU3 575 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 NARS2Q96I59 477 aaKnown RBP18.03■□□□□ 0.48
SDF4-205ENST00000465727 ZBP1Q9H171 429 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 ADAP2Q9NPF8 381 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 TICRRQ7Z2Z1 1910 aa18.03■□□□□ 0.48
SDF4-205ENST00000465727 NPIPA5A0A0B4J1W7 369 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 DISC1C4P0D8 188 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 MCIDASD6RGH6 385 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 NPIPA7E9PJI5 369 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 MOSPD3O75425 235 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 GLCEO94923 617 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 PAK4O96013 591 aaPredicted RBP18.02■□□□□ 0.48
SDF4-205ENST00000465727 NPIPA8P0DM63 369 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 SLC25A4P12235 298 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 CSRP1P21291 193 aaKnown RBP18.02■□□□□ 0.48
SDF4-205ENST00000465727 ADH7P40394 386 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 PSMD4P55036 377 aaKnown RBP18.02■□□□□ 0.48
SDF4-205ENST00000465727 ALKBH1Q13686 389 aaKnown RBP18.02■□□□□ 0.48
SDF4-205ENST00000465727 DHCR24Q15392 516 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 TRMT12Q53H54 448 aaKnown RBP18.02■□□□□ 0.48
SDF4-205ENST00000465727 LY6G6FQ5SQ64 297 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 GLT8D1Q68CQ7 371 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms