RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 ZNF275Q9NSD4 429 aaPredicted RBP10.11□□□□□ -0.79
CNOT4-208ENST00000465721 B3GNT2Q9NY97 397 aa10.11□□□□□ -0.79
CNOT4-208ENST00000465721 TREM2Q9NZC2 230 aa10.11□□□□□ -0.79
CNOT4-208ENST00000465721 MYEF2Q9P2K5 600 aaKnown RBP10.11□□□□□ -0.79
CNOT4-208ENST00000465721 REV1Q9UBZ9 1251 aa10.11□□□□□ -0.79
CNOT4-208ENST00000465721 SEC14L4Q9UDX3 406 aa10.11□□□□□ -0.79
CNOT4-208ENST00000465721 LOC105371242A0A075B767 164 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 A0A096LPI6 279 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 TRAV20A0A0B4J274 112 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 ZNF99A8MXY4 864 aaPredicted RBP10.1□□□□□ -0.79
CNOT4-208ENST00000465721 E9PBE3 544 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 SLC43A1O75387 559 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 SPAG7O75391 227 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 NUDT17P0C025 328 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 ZNF14P17017 642 aaPredicted RBP10.1□□□□□ -0.79
CNOT4-208ENST00000465721 COL8A2P25067 703 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 CDKN2CP42773 168 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 ALDH3B1P43353 468 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 LIMS1P48059 325 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 GUCA2AQ02747 115 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 EGR4Q05215 589 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 MAD2L1BPQ15013 274 aaPredicted RBP10.1□□□□□ -0.79
CNOT4-208ENST00000465721 DPY19L1Q2PZI1 675 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 LIN52Q52LA3 116 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 RNF220Q5VTB9 566 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 TMEM123Q8N131 208 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 VPS37AQ8NEZ2 397 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 IL17RDQ8NFM7 739 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 MFSD8Q8NHS3 518 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 STK35Q8TDR2 534 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 TCP10LQ8TDR4 215 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 RDH5Q92781 318 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 PPP1R36Q96LQ0 422 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 SYT3Q9BQG1 590 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 MTHFD2LQ9H903 347 aaPredicted RBP10.1□□□□□ -0.79
CNOT4-208ENST00000465721 BTNL2Q9UIR0 455 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 PRDM4Q9UKN5 801 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 CHST2Q9Y4C5 530 aa10.1□□□□□ -0.79
CNOT4-208ENST00000465721 TMPRSS2O15393 492 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 TRAF3IP2O43734 574 aaPredicted RBP10.09□□□□□ -0.79
CNOT4-208ENST00000465721 ITM2AO43736 263 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 AHSA1O95433 338 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 HLA-HP01893 362 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 GSNP06396 782 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 BPGMP07738 259 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 NR2F1P10589 423 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 ZNF35P13682 527 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 ZNF43P17038 809 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 TCN1P20061 433 aaPredicted RBP10.09□□□□□ -0.79
CNOT4-208ENST00000465721 GLRXP35754 106 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 CAPZA2P47755 286 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 SEC24CP53992 1094 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 COPZ1P61923 177 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 MRPS11P82912 194 aaKnown RBP10.09□□□□□ -0.79
CNOT4-208ENST00000465721 TXNL4AP83876 142 aaKnown RBP10.09□□□□□ -0.79
CNOT4-208ENST00000465721 FXNQ16595 210 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 PHYHD1Q5SRE7 291 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 C1QL2Q7Z5L3 287 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 LRP11Q86VZ4 500 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 PEX5LQ8IYB4 626 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 GPR137CQ8N3F9 429 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 ZNF781Q8N8C0 355 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 KIF18AQ8NI77 898 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 PNPT1Q8TCS8 783 aaKnown RBP10.09□□□□□ -0.79
CNOT4-208ENST00000465721 KTI12Q96EK9 354 aaPredicted RBP10.09□□□□□ -0.79
CNOT4-208ENST00000465721 TEX37Q96LM6 180 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 OR2M2Q96R28 347 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 SLC6A7Q99884 636 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 TMPRSS13Q9BYE2 586 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 MS4A5Q9H3V2 200 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 ZNF224Q9NZL3 707 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 ZNF443Q9Y2A4 671 aaPredicted RBP10.09□□□□□ -0.79
CNOT4-208ENST00000465721 DOCK11Q5JSL3 2073 aa10.09□□□□□ -0.79
CNOT4-208ENST00000465721 CCDC154A6NI56 674 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 PPIHO43447 177 aaKnown RBP10.08□□□□□ -0.8
CNOT4-208ENST00000465721 ETV4P43268 484 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 RPS5P46782 204 aaKnown RBP10.08□□□□□ -0.8
CNOT4-208ENST00000465721 ANXA11P50995 505 aaKnown RBP10.08□□□□□ -0.8
CNOT4-208ENST00000465721 MVDP53602 400 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 CLNS1AP54105 237 aaKnown RBP10.08□□□□□ -0.8
CNOT4-208ENST00000465721 CHI3L2Q15782 390 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 GSG1Q2KHT4 349 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 PDLIM3Q53GG5 364 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-208ENST00000465721 ATG16L1Q676U5 607 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 REP15Q6BDI9 236 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 FAHD2BQ6P2I3 314 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-208ENST00000465721 ZNF627Q7L945 461 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 SERPINA11Q86U17 422 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 RETREG3Q86VR2 466 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 CCDC36Q8IYA8 594 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 CLIP4Q8N3C7 705 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 RIBC1Q8N443 379 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-208ENST00000465721 ZDHHC22Q8N966 263 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 PIK3C3Q8NEB9 887 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 OR52P1PQ8NH57 321 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 SLC25A36Q96CQ1 311 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 FAHD2AQ96GK7 314 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 OXGR1Q96P68 337 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 JMJD8Q96S16 334 aa10.08□□□□□ -0.8
CNOT4-208ENST00000465721 ZNF416Q9BWM5 594 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms