RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 TMCO5AQ8N6Q1 288 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 ELOA3Q8NG57 546 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 PFN4Q8NHR9 129 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 SLC22A8Q8TCC7 542 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 C3orf49Q96BT1 292 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 C12orf43Q96C57 262 aaKnown RBP12.47□□□□□ -0.41
HDAC6-215ENST00000465457 TMCO6Q96DC7 493 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 SGTBQ96EQ0 304 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 TMEM80Q96HE8 168 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 OR52D1Q9H346 318 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 UBQLN3Q9H347 655 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 DSN1Q9H410 356 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 MRPS18AQ9NVS2 196 aaKnown RBP12.47□□□□□ -0.41
HDAC6-215ENST00000465457 AASSQ9UDR5 926 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 NPFFR2Q9Y5X5 522 aa12.47□□□□□ -0.41
HDAC6-215ENST00000465457 NBEAL1Q6ZS30 2694 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 MPDZO75970 2070 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 TRBV11-1A0A0K0K1C0 115 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 A0A1B0GTH9 108 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 H3BMQ9 156 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 CDC42EP2O14613 210 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 PRKYO43930 277 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 CTAG2O75638 210 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 INMTO95050 263 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 ZNF24P17028 368 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 CCNA2P20248 432 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 MAKP20794 623 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 ACVR2AP27037 513 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 PSMB9P28065 219 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 EVI2BP34910 448 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 SLC1A3P43003 542 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 MASP1P48740 699 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 DLX5P56178 289 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.46□□□□□ -0.41
HDAC6-215ENST00000465457 LSAMPQ13449 338 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 C1DQ13901 141 aaKnown RBP12.46□□□□□ -0.41
HDAC6-215ENST00000465457 CD226Q15762 336 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 BTBD16Q32M84 506 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 NXNL2Q5VZ03 156 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 ACSM5Q6NUN0 579 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 ARHGAP11AQ6P4F7 1023 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 C5orf46Q6UWT4 87 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 BIVMQ86UB2 503 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 OAFQ86UD1 273 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 OR5W2Q8NH69 310 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 LILRB4Q8NHJ6 448 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 COG8Q96MW5 612 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 ZNF582Q96NG8 517 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-215ENST00000465457 FUNDC2Q9BWH2 189 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 MEPEQ9NQ76 525 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-215ENST00000465457 C20orf141Q9NUB4 165 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 DNAJC27Q9NZQ0 273 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 ENPP5Q9UJA9 477 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 DIMT1Q9UNQ2 313 aaKnown RBP12.46□□□□□ -0.41
HDAC6-215ENST00000465457 ERGIC3Q9Y282 383 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 SIGLEC7Q9Y286 467 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 ZNF337Q9Y3M9 751 aa12.46□□□□□ -0.41
HDAC6-215ENST00000465457 M0R129 80 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 KPNA4O00629 521 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-215ENST00000465457 SLC22A1O15245 554 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 FADS1O60427 444 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 ADAM11O75078 769 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 GABARAPO95166 117 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 RAB36O95755 333 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 IFNGP01579 166 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 CHRNB4P30926 498 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 MAP2K4P45985 399 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 HTR3AP46098 478 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 MEOX1P50221 254 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 RNF144AP50876 292 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-215ENST00000465457 P2RX1P51575 399 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 CCR4P51679 360 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 PRPS1P60891 318 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 CRYZQ08257 329 aaKnown RBP12.45□□□□□ -0.42
HDAC6-215ENST00000465457 CLEC12AQ5QGZ9 265 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 H3F3CQ6NXT2 135 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 SLC30A6Q6NXT4 461 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 ATG4DQ86TL0 474 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-215ENST00000465457 P2RY8Q86VZ1 359 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 KRTAP1-3Q8IUG1 177 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 DND1Q8IYX4 353 aaKnown RBP12.45□□□□□ -0.42
HDAC6-215ENST00000465457 PRR22Q8IZ63 422 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 ANKK1Q8NFD2 765 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 OR4Q3Q8NH05 313 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 ZNF563Q8TA94 476 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 FAM57AQ8TBR7 257 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 ZFAND2BQ8WV99 257 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 LIPHQ8WWY8 451 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 YIPF6Q96EC8 236 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 SAMD8Q96LT4 415 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 UTP23Q9BRU9 249 aaKnown RBP12.45□□□□□ -0.42
HDAC6-215ENST00000465457 RHNO1Q9BSD3 238 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 MND1Q9BWT6 205 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 CHCHD3Q9NX63 227 aaKnown RBP12.45□□□□□ -0.42
HDAC6-215ENST00000465457 H2AFY2Q9P0M6 372 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-215ENST00000465457 TEKT2Q9UIF3 430 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 CARD8Q9Y2G2 431 aa12.45□□□□□ -0.42
HDAC6-215ENST00000465457 EML6Q6ZMW3 1958 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 RIIAD1A6NNX1 92 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 BHLHE40O14503 412 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms