RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 LIPHQ8WWY8 451 aa15.54■□□□□ 0.08
CPSF4-209ENST00000465132 PYDC1Q8WXC3 89 aa15.54■□□□□ 0.08
CPSF4-209ENST00000465132 DNAJC9Q8WXX5 260 aa15.54■□□□□ 0.08
CPSF4-209ENST00000465132 SLCO4A1Q96BD0 722 aa15.54■□□□□ 0.08
CPSF4-209ENST00000465132 CENPNQ96H22 339 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-209ENST00000465132 SF3B5Q9BWJ5 86 aaKnown RBP15.54■□□□□ 0.08
CPSF4-209ENST00000465132 ZNF556Q9HAH1 456 aa15.54■□□□□ 0.08
CPSF4-209ENST00000465132 S100A14Q9HCY8 104 aa15.54■□□□□ 0.08
CPSF4-209ENST00000465132 KIAA1549Q9HCM3 1950 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 EFCAB9A8MZ26 197 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 ENTPD5O75356 428 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 OR7A10O76100 309 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 CH25HO95992 272 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 RAF1P04049 648 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 IMPDH2P12268 514 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 FOSL1P15407 271 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 GSTM3P21266 225 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 SHC1P29353 583 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 OPRM1P35372 400 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 UGT2B15P54855 530 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 PRPS1P60891 318 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 PMS2P3Q13401 168 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 MICAQ29983 383 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 EXOC3L2Q2M3D2 409 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 OTUD3Q5T2D3 398 aaPredicted RBP15.53■□□□□ 0.08
CPSF4-209ENST00000465132 RPL13AP3Q6NVV1 102 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 WDR88Q6ZMY6 472 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 TMPRSS11FQ6ZWK6 438 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 NANOGNBQ7Z5D8 188 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 ZDHHC13Q8IUH4 622 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 OR5J2Q8NH18 312 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 LINC01560Q8TB33 94 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 GNPDA2Q8TDQ7 276 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 GIPC3Q8TF64 312 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 GSX1Q9H4S2 264 aaPredicted RBP15.53■□□□□ 0.08
CPSF4-209ENST00000465132 MRPL39Q9NYK5 338 aaKnown RBP15.53■□□□□ 0.08
CPSF4-209ENST00000465132 JKAMPQ9P055 326 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 MGAT4BQ9UQ53 548 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 ACANP16112 2415 aa15.53■□□□□ 0.08
CPSF4-209ENST00000465132 MED12Q93074 2177 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 TRBV4-1A0A0J9YWV2 114 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 AQP7P3A6NL99 342 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 EEF1E1-BLOC1S5C9J1V9 151 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 FTCDNL1E5RQL4 147 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 EEF1E1O43324 174 aaKnown RBP15.52■□□□□ 0.08
CPSF4-209ENST00000465132 AKAP8O43823 692 aaKnown RBP15.52■□□□□ 0.08
CPSF4-209ENST00000465132 FZD7O75084 574 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 ATE1O95260 518 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 IL18BPO95998 194 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 BGLAPP02818 100 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 ANXA8P13928 327 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 FUT1P19526 365 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 LIMS1P48059 325 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 SORDQ00796 357 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 FBXW10Q5XX13 1052 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 HDDC2Q7Z4H3 204 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 OAFQ86UD1 273 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 C9orf106Q8NAJ2 232 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 FNDC9Q8TBE3 224 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 GMPPAQ96IJ6 420 aaPredicted RBP15.52■□□□□ 0.08
CPSF4-209ENST00000465132 PTDSS2Q9BVG9 487 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 RNF122Q9H9V4 155 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 MEPEQ9NQ76 525 aaPredicted RBP15.52■□□□□ 0.08
CPSF4-209ENST00000465132 PARPBPQ9NWS1 579 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 CLCF1Q9UBD9 225 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 ENOPH1Q9UHY7 261 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 EMC9Q9Y3B6 208 aa15.52■□□□□ 0.08
CPSF4-209ENST00000465132 LOC102725191A0A1B0GVB3 256 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 H0YC42 278 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 CYTIPO60759 359 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 RCBTB2O95199 551 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 GRPRP30550 384 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 TPD52P55327 224 aaPredicted RBP15.51■□□□□ 0.07
CPSF4-209ENST00000465132 H3F3AP84243 136 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 IL1RL1Q01638 556 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 RASGEF1BQ0VAM2 473 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 COX10Q12887 443 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 KEAP1Q14145 624 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 DEFB113Q30KQ7 82 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 TMEM201Q5SNT2 666 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 C1orf94Q6P1W5 598 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 SHQ1Q6PI26 577 aaKnown RBP15.51■□□□□ 0.07
CPSF4-209ENST00000465132 OR5K1Q8NHB7 308 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 PFN4Q8NHR9 129 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 RNF128Q8TEB7 428 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 ZNF845Q96IR2 970 aaPredicted RBP15.51■□□□□ 0.07
CPSF4-209ENST00000465132 PSD2Q9BQI7 771 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 FUZQ9BT04 418 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 DCLRE1BQ9H816 532 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 PLEKHF2Q9H8W4 249 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 FANCFQ9NPI8 374 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 KIF17Q9P2E2 1029 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 NOX1Q9Y5S8 564 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 U3KQV3 271 aa15.51■□□□□ 0.07
CPSF4-209ENST00000465132 ZNF724A8MTY0 619 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 ANKRD65E5RJM6 399 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 G3V2T6 193 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 M0R082 166 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 SMAD9O15198 467 aaKnown RBP15.5■□□□□ 0.07
CPSF4-209ENST00000465132 AKR7A3O95154 331 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms