RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 ZNF99A8MXY4 864 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-220ENST00000464800 FTCDNL1E5RQL4 147 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 NPIPB7O75200 414 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 SEC14L2O76054 403 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 PNPP00491 289 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 GAAP10253 952 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 LIMS1P48059 325 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 COX20Q5RI15 118 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 CARM1Q86X55 608 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 VRK2Q86Y07 508 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 LRRC34Q8IZ02 419 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 KDM8Q8N371 416 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 OR52P1PQ8NH57 321 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 PNPT1Q8TCS8 783 aaKnown RBP12.57□□□□□ -0.4
MCF2L-220ENST00000464800 STK35Q8TDR2 534 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 RDH5Q92781 318 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 SLC25A36Q96CQ1 311 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 RACGAP1Q9H0H5 632 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 TREM2Q9NZC2 230 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 P2RX2Q9UBL9 471 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 ZNF443Q9Y2A4 671 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-220ENST00000464800 NOX1Q9Y5S8 564 aa12.57□□□□□ -0.4
MCF2L-220ENST00000464800 TRAV20A0A0B4J274 112 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 BIRC5O15392 142 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 AKAP8O43823 692 aaKnown RBP12.56□□□□□ -0.4
MCF2L-220ENST00000464800 HPXP02790 462 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 PRG2P13727 222 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 LBPP18428 481 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 TCN1P20061 433 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-220ENST00000464800 ALDH3B1P43353 468 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 RPS5P46782 204 aaKnown RBP12.56□□□□□ -0.4
MCF2L-220ENST00000464800 SLC1A6P48664 564 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 RPL14P50914 215 aaKnown RBP12.56□□□□□ -0.4
MCF2L-220ENST00000464800 RPS23P62266 143 aaKnown RBP12.56□□□□□ -0.4
MCF2L-220ENST00000464800 C1DQ13901 141 aaKnown RBP12.56□□□□□ -0.4
MCF2L-220ENST00000464800 MSMPQ1L6U9 139 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 RNF220Q5VTB9 566 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 ATG16L1Q676U5 607 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 FAHD2BQ6P2I3 314 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-220ENST00000464800 PIK3C3Q8NEB9 887 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 AENQ8WTP8 325 aaKnown RBP12.56□□□□□ -0.4
MCF2L-220ENST00000464800 ZNF837Q96EG3 531 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-220ENST00000464800 FAHD2AQ96GK7 314 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 OXGR1Q96P68 337 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 SORT1Q99523 831 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 SYT3Q9BQG1 590 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 TMEM109Q9BVC6 243 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 PTDSS2Q9BVG9 487 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 NUF2Q9BZD4 464 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 ZNF275Q9NSD4 429 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-220ENST00000464800 CALML5Q9NZT1 146 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 B3GAT1Q9P2W7 334 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 DSPPQ9NZW4 1301 aa12.56□□□□□ -0.4
MCF2L-220ENST00000464800 WNT9BO14905 357 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 PPIHO43447 177 aaKnown RBP12.55□□□□□ -0.4
MCF2L-220ENST00000464800 HLA-HP01893 362 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 GSNP06396 782 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 CD79AP11912 226 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 COL8A2P25067 703 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 CDKN2CP42773 168 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 ARFIP2P53365 341 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 CRISP3P54108 245 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 NME5P56597 212 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 TMEM33P57088 247 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 MRPS11P82912 194 aaKnown RBP12.55□□□□□ -0.4
MCF2L-220ENST00000464800 LRRC74AQ0VAA2 488 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 LARS2Q15031 903 aaKnown RBP12.55□□□□□ -0.4
MCF2L-220ENST00000464800 MAPK11Q15759 364 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 GSG1Q2KHT4 349 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 TRMT5Q32P41 509 aaKnown RBP12.55□□□□□ -0.4
MCF2L-220ENST00000464800 ZNF311Q5JNZ3 666 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 GKAP1Q5VSY0 366 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-220ENST00000464800 ZNF621Q6ZSS3 439 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 MS4A3Q96HJ5 214 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 TEX37Q96LM6 180 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 OR2M2Q96R28 347 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 ZNF416Q9BWM5 594 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 SUCNR1Q9BXA5 334 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 ARMC7Q9H6L4 198 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 CACYBPQ9HB71 228 aaKnown RBP12.55□□□□□ -0.4
MCF2L-220ENST00000464800 SEC14L4Q9UDX3 406 aa12.55□□□□□ -0.4
MCF2L-220ENST00000464800 LOC105371242A0A075B767 164 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 M0R3G1 203 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 AIM2O14862 343 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 KRT75O95678 551 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 BCHEP06276 602 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 GLRXP35754 106 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 SEC24CP53992 1094 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 UFM1P61960 85 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 GALK2Q01415 458 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 EGR4Q05215 589 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 MAD2L1BPQ15013 274 aaPredicted RBP12.54□□□□□ -0.4
MCF2L-220ENST00000464800 AWAT1Q58HT5 328 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 SERPINA11Q86U17 422 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 TMEM123Q8N131 208 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 CLIP4Q8N3C7 705 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 MGARPQ8TDB4 240 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 YIPF5Q969M3 257 aa12.54□□□□□ -0.4
MCF2L-220ENST00000464800 TRIM44Q96DX7 344 aaPredicted RBP12.54□□□□□ -0.4
MCF2L-220ENST00000464800 KTI12Q96EK9 354 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms