RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 OR5T3Q8NGG3 340 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 EDDM13A0A1B0GTR0 161 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 UBE2QL1A1L167 161 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 OR2W5A6NFC9 320 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 HMSDA8MTL9 139 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 RASGRP1O95267 797 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 RPS4Y1P22090 263 aaKnown RBP11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 CALCRP30988 508 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 POU4F2Q12837 409 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 IL10RAQ13651 578 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 FAM53BQ14153 422 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 C4orf46Q504U0 113 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 ARHGAP11AQ6P4F7 1023 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 TMEM88Q6PEY1 159 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 HSD17B13Q7Z5P4 300 aaPredicted RBP11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 OR10K1Q8NGX5 313 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 OR14A16Q8NHC5 309 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 TCF7L1Q9HCS4 588 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 LHX6Q9UPM6 363 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 CHD9Q3L8U1 2897 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 TMEM72A0PK05 275 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 RAD1O60671 282 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 ACRP10323 421 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 SPI1P17947 270 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 DIO1P49895 249 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 VASPP50552 380 aaPredicted RBP11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 TNFRSF17Q02223 184 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 UBXN2BQ14CS0 331 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 LRRC37A5PQ49AS3 106 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 SHEQ5VZ18 495 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 TSSK4Q6SA08 328 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 NPEPL1Q8NDH3 523 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 SP7Q8TDD2 431 aaPredicted RBP11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 MIB2Q96AX9 1013 aa11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 ADAT1Q9BUB4 502 aaKnown RBP11.51□□□□□ -0.57
CLCNKA-204ENST00000464764 GRXCR1A8MXD5 290 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 KCNAB3O43448 404 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 FGF17O60258 216 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 RBBP9O75884 186 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 IRF4Q15306 451 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 FBXO42Q6P3S6 717 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 LRRN1Q6UXK5 716 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 BPIFCQ8NFQ6 507 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 OR51D1Q8NGF3 324 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 ATOH1Q92858 354 aaPredicted RBP11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 DNAJA3Q96EY1 480 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 ZNF75AQ96N20 296 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 HPF1Q9NWY4 346 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 GLS2Q9UI32 602 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 SERTAD3Q9UJW9 196 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 C19orf53Q9UNZ5 99 aaPredicted RBP11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 PRKNO60260 465 aaPredicted RBP11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 CTNSO60931 367 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 CDC123O75794 336 aaPredicted RBP11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 TPPPO94811 219 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 GLSO94925 669 aaPredicted RBP11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 CD3DP04234 171 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 GTF2F2P13984 249 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 MPGP29372 298 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 ACAA2P42765 397 aaKnown RBP11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 LTBQ06643 244 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 LGALS3BPQ08380 585 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 ATXN7L3Q14CW9 347 aaPredicted RBP11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 ZNF425Q6IV72 752 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 DGAT2L6Q6ZPD8 337 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 CLRN3Q8NCR9 226 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 PXT1Q8NFP0 134 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 FGF13Q92913 245 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 TAS2R3Q9NYW6 316 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 FRRS1LQ9P0K9 344 aa11.5□□□□□ -0.57
CLCNKA-204ENST00000464764 TRAV14DV4A0A0A6YYC5 116 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 TVP23AA6NH52 213 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 CTSVO60911 334 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 GPANK1O95872 356 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 AGR2O95994 175 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 LIPCP11150 499 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 DRD3P35462 400 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 RBMS2Q15434 407 aaKnown RBP11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 NNATQ16517 81 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 FHL5Q5TD97 284 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 LIPNQ5VXI9 398 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 KIRREL2Q6UWL6 708 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 NDUFAF7Q7L592 441 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 TMED4Q7Z7H5 227 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 UTP23Q9BRU9 249 aaKnown RBP11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 MFRPQ9BY79 579 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 TRAV18A0A075B6X5 111 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 H7C1C5 153 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 ITGA10O75578 1167 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 NDUFB2O95178 105 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 EPCAMP16422 314 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 DDX6P26196 483 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 CMPK1P30085 196 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 LCN6P62502 163 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 NAXDQ8IW45 347 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 CMTM3Q96MX0 182 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 FBXO4Q9UKT5 387 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 MAFFQ9ULX9 164 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 SULT1B1O43704 296 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms