RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 KCNJ13O60928 360 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 PDGFAP04085 211 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 ATP1B1P05026 303 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 KLK3P07288 261 aaPredicted RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 HOXB5P09067 269 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 LIMS3P0CW19 117 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 LIMS4P0CW20 117 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 AKAIN1P0CW23 69 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 SRMP19623 302 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 CRYBB2P43320 205 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 RABIFP47224 123 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 BLOC1S1P78537 153 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 CDC20Q12834 499 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 SLC9A3R2Q15599 337 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 NKAIN2Q5VXU1 208 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 NIPAL3Q6P499 406 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 ZNF440Q8IYI8 595 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 PM20D2Q8IYS1 436 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 C12orf45Q8N5I9 185 aaPredicted RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 LINC01555Q8NAE3 123 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 OR4D11Q8NGI4 311 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 ZNF285Q96NJ3 590 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 LPAR4Q99677 370 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 C7orf50Q9BRJ6 194 aaKnown RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 RNF32Q9H0A6 362 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 OR10A5Q9H207 317 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 C20orf141Q9NUB4 165 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 GLTPQ9NZD2 209 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 EXO1Q9UQ84 846 aaKnown RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 A0A0A6YYJ9 748 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 FAM221BA6H8Z2 402 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 HOXC11O43248 304 aaPredicted RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 PNMTP11086 282 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 PRPH2P23942 346 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 EIF5AP63241 154 aaKnown RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 CSNK2A1P68400 391 aaPredicted RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 RUNX2Q13950 521 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 PRSS41Q7RTY9 318 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 GRAMD2AQ8IUY3 354 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 RNF113BQ8IZP6 322 aaKnown RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 FAM160A2Q8N612 972 aaPredicted RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 CSNK2A3Q8NEV1 391 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 OR6F1Q8NGZ6 308 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 SLC22A8Q8TCC7 542 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 KCTD12Q96CX2 325 aaKnown RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 SENP5Q96HI0 755 aaPredicted RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 URM1Q9BTM9 101 aaKnown RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 KLK11Q9UBX7 282 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 HHLA2Q9UM44 414 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 RIF1Q5UIP0 2472 aaKnown RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 C9J4A7 227 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 G3V3Y1 287 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 ST6GAL1P15907 406 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 ZNF43P17038 809 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 PVALBP20472 110 aaPredicted RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 M6PRP20645 277 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 TMEM52BQ4KMG9 183 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 PAQR8Q8TEZ7 354 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 SPACA5Q96QH8 159 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 EDARQ9UNE0 448 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 LSM5Q9Y4Y9 91 aaKnown RBP8.36□□□□□ -1.07
HPS4-208ENST00000464362 B3GALT1Q9Y5Z6 326 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 ROS1P08922 2347 aa8.36□□□□□ -1.07
HPS4-208ENST00000464362 NPIPA2E9PIF3 369 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 NPIPA3F8WFD2 350 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 FBXO24O75426 580 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 GLI4P10075 376 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 EN2P19622 333 aaPredicted RBP8.35□□□□□ -1.07
HPS4-208ENST00000464362 SRSF5Q13243 272 aaKnown RBP8.35□□□□□ -1.07
HPS4-208ENST00000464362 TDGQ13569 410 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 SERTAD2Q14140 314 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 KCNAB1Q14722 419 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 TCTN1Q2MV58 587 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 GLYATL3Q5SZD4 288 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 FAM69AQ5T7M9 428 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 WBP2NLQ6ICG8 309 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 GPR155Q7Z3F1 870 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 SPRED2Q7Z698 418 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 ABI3BPQ7Z7G0 1075 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 GLB1L2Q8IW92 636 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 KLHDC8BQ8IXV7 354 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 OR8D4Q8NGM9 314 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 ELP5Q8TE02 316 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 ZBTB8AQ96BR9 441 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 SFXN2Q96NB2 322 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 EMC6Q9BV81 110 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 EIF5A2Q9GZV4 153 aaKnown RBP8.35□□□□□ -1.07
HPS4-208ENST00000464362 C20orf85Q9H1P6 137 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 KIR3DX1Q9H7L2 352 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 NIPAL2Q9H841 368 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 TBX21Q9UL17 535 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 EMC9Q9Y3B6 208 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 SURF4O15260 269 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 DUX1O43812 170 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 GPRIN2O60269 458 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 ALX3O95076 343 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 C1QBP02746 253 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 ERCC1P07992 297 aaPredicted RBP8.35□□□□□ -1.07
HPS4-208ENST00000464362 NFYAP23511 347 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms