RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 PIK3C3Q8NEB9 887 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 MFSD8Q8NHS3 518 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 MGARPQ8TDB4 240 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 SLC25A36Q96CQ1 311 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 ZNF385DQ9H6B1 395 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 ZNF665Q9H7R5 613 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 ESM1Q9NQ30 184 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 ASIC5Q9NY37 505 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 DUSP13Q9UII6 198 aa12.42□□□□□ -0.42
SMC1A-204ENST00000463684 A0A096LPI6 279 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 ZNF99A8MXY4 864 aaPredicted RBP12.41□□□□□ -0.42
SMC1A-204ENST00000463684 PLPP2O43688 288 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 TGP01266 2768 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 FAM153BP0C7A2 387 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 NR2F1P10589 423 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 NCF2P19878 526 aaPredicted RBP12.41□□□□□ -0.42
SMC1A-204ENST00000463684 MAD2L1BPQ15013 274 aaPredicted RBP12.41□□□□□ -0.42
SMC1A-204ENST00000463684 MSMPQ1L6U9 139 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 GSG1Q2KHT4 349 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 SMU1Q2TAY7 513 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 MIDNQ504T8 468 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 DCAF12L2Q5VW00 463 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 RBMS3Q6XE24 437 aaKnown RBP12.41□□□□□ -0.42
SMC1A-204ENST00000463684 RNF130Q86XS8 419 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 LRRC17Q8N6Y2 441 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 STK35Q8TDR2 534 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 RAB39BQ96DA2 213 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 ZNF837Q96EG3 531 aaPredicted RBP12.41□□□□□ -0.42
SMC1A-204ENST00000463684 MS4A3Q96HJ5 214 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 OXGR1Q96P68 337 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 TMPRSS13Q9BYE2 586 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 PPCSQ9HAB8 311 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 RLIMQ9NVW2 624 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 ZDHHC2Q9UIJ5 367 aa12.41□□□□□ -0.42
SMC1A-204ENST00000463684 ZNF346Q9UL40 294 aaKnown RBP12.41□□□□□ -0.42
SMC1A-204ENST00000463684 NUP214P35658 2090 aaPredicted RBP12.41□□□□□ -0.42
SMC1A-204ENST00000463684 A0A1W2PPW3 197 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 AKAP8O43823 692 aaKnown RBP12.4□□□□□ -0.42
SMC1A-204ENST00000463684 SEC14L2O76054 403 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 HLA-HP01893 362 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 PNMTP11086 282 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 NAT2P11245 290 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 ZNF35P13682 527 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 ADRA2CP18825 462 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 RPS4Y1P22090 263 aaKnown RBP12.4□□□□□ -0.42
SMC1A-204ENST00000463684 SERPINB5P36952 375 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 ACAA2P42765 397 aaKnown RBP12.4□□□□□ -0.42
SMC1A-204ENST00000463684 TXNL4AP83876 142 aaKnown RBP12.4□□□□□ -0.42
SMC1A-204ENST00000463684 MVKQ03426 396 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 PIGFQ07326 219 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 GLIPR1L2Q4G1C9 344 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 LRP11Q86VZ4 500 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 TREML1Q86YW5 311 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 TRIML2Q8N7C3 387 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 KIF18AQ8NI77 898 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 MECRQ9BV79 373 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 TXLNGYQ9BZA5 131 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 B3GNT2Q9NY97 397 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 GPR160Q9UJ42 338 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 FZR1Q9UM11 496 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 PPIAL4AQ9Y536 164 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 CORINQ9Y5Q5 1042 aa12.4□□□□□ -0.42
SMC1A-204ENST00000463684 CDHR4A6H8M9 788 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 M0R3G1 203 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 NPIPB7O75200 414 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 RP2O75695 350 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 NCR1O76036 304 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 PRSS23O95084 383 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 SHBGP04278 402 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 GATA3P23771 443 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 LSP1P33241 339 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 RPS5P46782 204 aaKnown RBP12.39□□□□□ -0.43
SMC1A-204ENST00000463684 SELENOVP59797 346 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 CASP8Q14790 479 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 NKPD1Q17RQ9 610 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 MMEL1Q495T6 779 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 LIN52Q52LA3 116 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 ATG16L1Q676U5 607 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 OR52P1PQ8NH57 321 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 C22orf15Q8WYQ4 148 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 TESCQ96BS2 214 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 C7orf69Q9H7B7 122 aa12.39□□□□□ -0.43
SMC1A-204ENST00000463684 MYEF2Q9P2K5 600 aaKnown RBP12.39□□□□□ -0.43
SMC1A-204ENST00000463684 FTCDNL1E5RQL4 147 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 CDC14BO60729 498 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 RAB36O95755 333 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 ARAFP10398 606 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 ZNF14P17017 642 aaPredicted RBP12.38□□□□□ -0.43
SMC1A-204ENST00000463684 S100A3P33764 101 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 RAD52P43351 418 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 PTDSS1P48651 473 aaKnown RBP12.38□□□□□ -0.43
SMC1A-204ENST00000463684 TEKQ02763 1124 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 ZP4Q12836 540 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 DPY19L1Q2PZI1 675 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 ALKBH6Q3KRA9 238 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 AVPI1Q5T686 147 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 TMEM154Q6P9G4 183 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 VRK2Q86Y07 508 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 RNF217Q8TC41 542 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 UBLCP1Q8WVY7 318 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms