RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	COMTD1	Q86VU5	262 aa		9.62	□□□□□ -0.87
PTPN7-204	ENST00000462815	CARM1	Q86X55	608 aa		9.62	□□□□□ -0.87
PTPN7-204	ENST00000462815	CADM2	Q8N3J6	435 aa		9.62	□□□□□ -0.87
PTPN7-204	ENST00000462815	TRIML2	Q8N7C3	387 aa		9.62	□□□□□ -0.87
PTPN7-204	ENST00000462815	OR2M2	Q96R28	347 aa		9.62	□□□□□ -0.87
PTPN7-204	ENST00000462815	OR52E6	Q96RD3	313 aa		9.62	□□□□□ -0.87
PTPN7-204	ENST00000462815	KCNS3	Q9BQ31	491 aa		9.62	□□□□□ -0.87
PTPN7-204	ENST00000462815	SPATA9	Q9BWV2	254 aa		9.62	□□□□□ -0.87
PTPN7-204	ENST00000462815	TAPBPL	Q9BX59	468 aa		9.62	□□□□□ -0.87
PTPN7-204	ENST00000462815	MOV10	Q9HCE1	1003 aa	Known RBP	9.62	□□□□□ -0.87
PTPN7-204	ENST00000462815	P2RX2	Q9UBL9	471 aa		9.62	□□□□□ -0.87
PTPN7-204	ENST00000462815	FBXO9	Q9UK97	447 aa	Predicted RBP	9.62	□□□□□ -0.87
PTPN7-204	ENST00000462815	LOC102725191	A0A1B0GVB3	256 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	WNT9B	O14905	357 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	KRT33A	O76009	404 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	SNUPN	O95149	360 aa	Known RBP	9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	BCHE	P06276	602 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	ZCCHC18	P0CG32	403 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	ZNF35	P13682	527 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	ZNF14	P17017	642 aa	Predicted RBP	9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	RPS5	P46782	204 aa	Known RBP	9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	CLDN17	P56750	224 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	HOXC5	Q00444	222 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	LRRC74A	Q0VAA2	488 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	ADRM1	Q16186	407 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	CEACAM16	Q2WEN9	425 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	HSP90B2P	Q58FF3	399 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	ZNF627	Q7L945	461 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	SPATA21	Q7Z572	469 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	UBASH3B	Q8TF42	649 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	CKAP2	Q8WWK9	683 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	MRPL24	Q96A35	216 aa	Known RBP	9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	TMEM19	Q96HH6	336 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	MRPL37	Q9BZE1	423 aa	Known RBP	9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	PLA2G12A	Q9BZM1	189 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	CRLF2	Q9HC73	371 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	CMYA5	Q8N3K9	4069 aa		9.61	□□□□□ -0.87
PTPN7-204	ENST00000462815	TMEM120B	A0PK00	339 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	ZNF99	A8MXY4	864 aa	Predicted RBP	9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	FAM157A	C9JC47	383 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815		M0R082	166 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	RFXANK	O14593	260 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	SEC14L2	O76054	403 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	AHSA1	O95433	338 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	HPR	P00739	348 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	ADRA2A	P08913	450 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	NUDT7	P0C024	238 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	HLA-DOB	P13765	273 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	NR4A1	P22736	598 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	HTR2A	P28223	471 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	EPHA3	P29320	983 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	ARR3	P36575	388 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	EVX1	P49640	407 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	COMP	P49747	757 aa	Predicted RBP	9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	ANXA11	P50995	505 aa	Known RBP	9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	CRISP3	P54108	245 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	WDR4	P57081	412 aa	Known RBP	9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	DSTN	P60981	165 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	BST1	Q10588	318 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	SNTB2	Q13425	540 aa	Known RBP	9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	CCNI	Q14094	377 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	FXN	Q16595	210 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	KRT80	Q6KB66	452 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	CLDND2	Q8NHS1	167 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	ZNF417	Q8TAU3	575 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	ZFAND2B	Q8WV99	257 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	TAAR8	Q969N4	342 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	SLC35B4	Q969S0	331 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	SLC41A3	Q96GZ6	507 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	MS4A3	Q96HJ5	214 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	MAEL	Q96JY0	434 aa	Known RBP	9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	ANKRD27	Q96NW4	1050 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	OXGR1	Q96P68	337 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	ZNF587	Q96SQ5	575 aa	Predicted RBP	9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	TPK1	Q9H3S4	243 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	WDR55	Q9H6Y2	383 aa	Predicted RBP	9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	TPT1P8	Q9HAU6	139 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	C12orf10	Q9HB07	376 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	BCL2L10	Q9HD36	194 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	KCNK9	Q9NPC2	374 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	MYEF2	Q9P2K5	600 aa	Known RBP	9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	SPEF1	Q9Y4P9	236 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815	MGAM2	Q2M2H8	2515 aa		9.6	□□□□□ -0.87
PTPN7-204	ENST00000462815		A0A0G2JPF8	293 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	SH3PXD2B	A1X283	911 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	HNRNPCL2	B2RXH8	293 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	HNRNPCL3	B7ZW38	293 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	MS4A18	H0YCH9	400 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	TM9SF1	O15321	606 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	HNRNPCL1	O60812	293 aa	Known RBP	9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	SNN	O75324	88 aa	Predicted RBP	9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	SLC43A1	O75387	559 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	RP2	O75695	350 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	NCR1	O76036	304 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	KRT75	O95678	551 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	HLA-H	P01893	362 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	HPX	P02790	462 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	HNRNPCL4	P0DMR1	293 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	BMP2	P12643	396 aa		9.59	□□□□□ -0.87
PTPN7-204	ENST00000462815	IFNGR1	P15260	489 aa		9.59	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms