RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 MICAQ29983 383 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 EXOC3L2Q2M3D2 409 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 CMPK2Q5EBM0 449 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 NHSL2Q5HYW2 709 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 C6orf52Q5T4I8 152 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF626Q68DY1 528 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 MARCH9Q86YJ5 346 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 PRR22Q8IZ63 422 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 TAGAPQ8N103 731 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 SLC34A3Q8N130 599 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 OR4C3Q8NH37 302 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 OR8K3Q8NH51 312 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 NUBPLQ8TB37 319 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 GIPC3Q8TF64 312 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 PHF10Q8WUB8 498 aaKnown RBP6.64□□□□□ -1.35
UBE4B-204ENST00000462658 OIT3Q8WWZ8 545 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 NR4A3Q92570 626 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 CNOT9Q92600 299 aaKnown RBP6.64□□□□□ -1.35
UBE4B-204ENST00000462658 OMA1Q96E52 524 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 PRRC1Q96M27 445 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 MCHR1Q99705 422 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 FNDC11Q9BVV2 318 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 DEFB126Q9BYW3 111 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 GABARAPL1Q9H0R8 117 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 Q9H521 79 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 POLR1BQ9H9Y6 1135 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 LIN28AQ9H9Z2 209 aaKnown RBP6.64□□□□□ -1.35
UBE4B-204ENST00000462658 UBQLN4Q9NRR5 601 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 SMPD3Q9NY59 655 aaPredicted RBP6.64□□□□□ -1.35
UBE4B-204ENST00000462658 ACAD8Q9UKU7 415 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 TMCC3Q9ULS5 477 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 HS3ST3B1Q9Y662 390 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 AP4B1Q9Y6B7 739 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 KIF26BQ2KJY2 2108 aa6.64□□□□□ -1.35
UBE4B-204ENST00000462658 CFAP47Q6ZTR5 3102 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 NSG1A0A0A6YYJ2 146 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 TRBV4-1A0A0J9YWV2 114 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 A0A1W2PRQ8 180 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 SERINC4A6NH21 518 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 CPSF4LA6NMK7 179 aaKnown RBP6.63□□□□□ -1.35
UBE4B-204ENST00000462658 C21orf140B9A014 251 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 STMND1H3BQB6 276 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 WWP2O00308 870 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 SOCS6O14544 535 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 DENRO43583 198 aaKnown RBP6.63□□□□□ -1.35
UBE4B-204ENST00000462658 TSPAN2O60636 221 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 RAD1O60671 282 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 BCAS1O75363 584 aaPredicted RBP6.63□□□□□ -1.35
UBE4B-204ENST00000462658 CCNB2O95067 398 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 SNAP29O95721 258 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 OXSR1O95747 527 aaPredicted RBP6.63□□□□□ -1.35
UBE4B-204ENST00000462658 CSTAP01040 98 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 RPSAP08865 295 aaKnown RBP6.63□□□□□ -1.35
UBE4B-204ENST00000462658 GKN3PP0CG01 181 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 THRBP10828 461 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 COX6A1P12074 109 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 CYP4B1P13584 511 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 PRG2P13727 222 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 ANXA8P13928 327 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 TBXA2RP21731 343 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 IGFBP5P24593 272 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 ABCD3P28288 659 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 RBMS1P29558 406 aaKnown RBP6.63□□□□□ -1.35
UBE4B-204ENST00000462658 OTX2P32243 289 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 DLSTP36957 453 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 DAPP51397 102 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF136P52737 540 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 PNLIPRP2P54317 469 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 RAD23AP54725 363 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 TAS2R41P59536 307 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 RPS18P62269 152 aaKnown RBP6.63□□□□□ -1.35
UBE4B-204ENST00000462658 ST3GAL3Q11203 375 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 MED21Q13503 144 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 DGCR6Q14129 220 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 FGFBP1Q14512 234 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 RFX4Q33E94 735 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 ANXA2RQ3ZCQ2 193 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 KLHL26Q53HC5 615 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 FGD3Q5JSP0 725 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 ENTPD8Q5MY95 495 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 DCST1Q5T197 706 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 KDM4DQ6B0I6 523 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 FAHD1Q6P587 224 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 C16orf47Q6ZP98 133 aaPredicted RBP6.63□□□□□ -1.35
UBE4B-204ENST00000462658 PLEKHM3Q6ZWE6 761 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 NDUFAF7Q7L592 441 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 RANBP3LQ86VV4 465 aaPredicted RBP6.63□□□□□ -1.35
UBE4B-204ENST00000462658 GRAMD2AQ8IUY3 354 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 DHRSXQ8N5I4 330 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 SLC5A8Q8N695 610 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 OR11G2Q8NGC1 345 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 OR10G2Q8NGC3 310 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 M1APQ8TC57 530 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 ELP5Q8TE02 316 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 CYGBQ8WWM9 190 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 IGFBPL1Q8WX77 278 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 ADAMTS14Q8WXS8 1223 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 SLC41A3Q96GZ6 507 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 IMMP1LQ96LU5 166 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF570Q96NI8 536 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms