RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 KLHL9Q9P2J3 617 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 MGAM2Q2M2H8 2515 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 DYSFO75923 2080 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 GMNCA6NCL1 334 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 PRORSD1PA6NEY8 169 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 OR5H1A6NKK0 313 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 A8MVM7 634 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 NME4O00746 187 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 CCDC22O60826 627 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 SERPINB7O75635 380 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 AKR7A3O95154 331 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF16P17020 682 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 GGT1P19440 569 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 CXCR1P25024 350 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 TTKP33981 857 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 MAP2K6P52564 334 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 NUDT6P53370 316 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 COPZ1P61923 177 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC35A1P78382 337 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 LOXL1Q08397 574 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 CEACAM7Q14002 265 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC17A1Q14916 467 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 OR1Q1Q15612 314 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 OR7A5Q15622 319 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 C1orf140Q5VVS0 124 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 FAM91A1Q658Y4 838 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 PAQR6Q6TCH4 344 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 HACD2Q6Y1H2 254 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 WDR88Q6ZMY6 472 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 PIGWQ7Z7B1 504 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 PATL1Q86TB9 770 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC15A3Q8IY34 581 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF525Q8N782 197 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 TMEM99Q8N816 258 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 PCYOX1LQ8NBM8 494 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 BHLHE22Q8NFJ8 381 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 OR52E4Q8NGH9 312 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 PIGXQ8TBF5 258 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 KTI12Q96EK9 354 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 TNFRSF13CQ96RJ3 184 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 RHNO1Q9BSD3 238 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 NSRP1Q9H0G5 558 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 PCDHAC1Q9H158 963 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 ARMC7Q9H6L4 198 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 EVA1AQ9H8M9 152 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 CBLN4Q9NTU7 201 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 GID8Q9NWU2 228 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 SEC14L4Q9UDX3 406 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 CDC42EP3Q9UKI2 254 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 FLVCR1Q9Y5Y0 555 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC25A15Q9Y619 301 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 TRRAPQ9Y4A5 3859 aa6.94□□□□□ -1.3
CDC42BPA-210ENST00000462553 A0A087WUJ7 227 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 AQP7P3A6NL99 342 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 H7C417 338 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 PDLIM1O00151 329 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 AIM2O14862 343 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 EIF1BO60739 113 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 FMO6PO60774 539 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 RAD51DO75771 328 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 IGHV3-9P01782 118 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 C8BP07358 591 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 ITGA5P08648 1049 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 IGHV4-31P0DP07 118 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC25A16P16260 332 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 TNFRSF1BP20333 461 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 IGFBP5P24593 272 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 CD40P25942 277 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 PRDX6P30041 224 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 MMP16P51512 607 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC7A2P52569 658 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 CDH12P55289 794 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 FOXG1P55316 489 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC25A3Q00325 362 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 SRSF2Q01130 221 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 ALG10BQ5I7T1 473 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 OTUD3Q5T2D3 398 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 INTS11Q5TA45 600 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 AGAP6Q5VW22 663 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 ERICH5Q6P6B1 374 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 CLEC2AQ6UVW9 174 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 LINC00114Q6XXX2 140 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 GALNT5Q7Z7M9 940 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 P2RY8Q86VZ1 359 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 MICU2Q8IYU8 434 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 MUC15Q8N387 334 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZIC4Q8N9L1 334 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 OR9K2Q8NGE7 335 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 OR52N5Q8NH56 324 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 C10orf105Q8TEF2 133 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC38A4Q969I6 547 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 TAAR8Q969N4 342 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZHX1-C8orf76Q96EF9 292 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 ADAD1Q96M93 576 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 MCHR1Q99705 422 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 SH3GL1Q99961 368 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 DHRS9Q9BPW9 319 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 ECSITQ9BQ95 431 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 AMBRA1Q9C0C7 1298 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 ABCD2Q9UBJ2 740 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms