RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 GZMMP51124 257 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 SH3BGRP55822 239 aaPredicted RBP8.9□□□□□ -0.98
SF3A3-204ENST00000462258 PRPS1P60891 318 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 ROR2Q01974 943 aaKnown RBP8.9□□□□□ -0.98
SF3A3-204ENST00000462258 POU3F1Q03052 451 aaPredicted RBP8.9□□□□□ -0.98
SF3A3-204ENST00000462258 VEZF1Q14119 521 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 ETFDHQ16134 617 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 ENTPD8Q5MY95 495 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 HMBOX1Q6NT76 420 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 CLEC9AQ6UXN8 241 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 H1FNTQ75WM6 255 aaPredicted RBP8.9□□□□□ -0.98
SF3A3-204ENST00000462258 UEVLDQ8IX04 471 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 DEPDC4Q8N2C3 294 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 C10orf53Q8N6V4 93 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 OR4D11Q8NGI4 311 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 RASSF5Q8WWW0 418 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 LRRC58Q96CX6 371 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 MOGAT1Q96PD6 335 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 SH3GL1Q99961 368 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 NELFAQ9H3P2 528 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 OBP2BQ9NPH6 170 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 MED4Q9NPJ6 270 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 CAPN7Q9Y6W3 813 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 ZANQ9Y493 2812 aa8.9□□□□□ -0.99
SF3A3-204ENST00000462258 NAV3Q8IVL0 2385 aa8.9□□□□□ -0.99
SF3A3-204ENST00000462258 CR1P17927 2039 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 E7EQL1 145 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 ATP6V1G2-DDX39BF2Z307 99 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 HPRP00739 348 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 MT-ATP6P00846 226 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 IGHV4-39P01824 125 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 TTKP33981 857 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 CRYBA2P53672 197 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 UBE2NP61088 152 aaKnown RBP8.89□□□□□ -0.99
SF3A3-204ENST00000462258 LTBQ06643 244 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 PUDPQ08623 228 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 AGAP6Q5VW22 663 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 C11orf71Q6IPW1 123 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 ERICH5Q6P6B1 374 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 WDR88Q6ZMY6 472 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 Q71RC1 249 aaPredicted RBP8.89□□□□□ -0.99
SF3A3-204ENST00000462258 CCDC80Q76M96 950 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 CALHM3Q86XJ0 350 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 RBM45Q8IUH3 476 aaKnown RBP8.89□□□□□ -0.99
SF3A3-204ENST00000462258 TMEM123Q8N131 208 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 FBXL14Q8N1E6 418 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 MUC15Q8N387 334 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 GPR137CQ8N3F9 429 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 PCYOX1LQ8NBM8 494 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 PIK3C3Q8NEB9 887 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 ADAMTS16Q8TE57 1224 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 C10orf82Q8WW14 230 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 SLC41A3Q96GZ6 507 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 POM121Q96HA1 1249 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 BOD1Q96IK1 185 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 HS6ST2Q96MM7 605 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 ZNF317Q96PQ6 595 aaPredicted RBP8.89□□□□□ -0.99
SF3A3-204ENST00000462258 OR2M2Q96R28 347 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 DHRS9Q9BPW9 319 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 ECSITQ9BQ95 431 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 CACNG6Q9BXT2 260 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 GRIP2Q9C0E4 1043 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 PCDHAC1Q9H158 963 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 FKRPQ9H9S5 495 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 MRPL39Q9NYK5 338 aaKnown RBP8.89□□□□□ -0.99
SF3A3-204ENST00000462258 ARMCX1Q9P291 453 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 TLN2Q9Y4G6 2542 aa8.89□□□□□ -0.99
SF3A3-204ENST00000462258 NIPBLQ6KC79 2804 aaeCLIP8.88□□□□□ -0.99
SF3A3-204ENST00000462258 A0A096LPE4 126 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 ARPC4-TTLL3A0A0A6YYG9 625 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 IGHV1-18A0A0C4DH31 117 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 LOC102725191A0A1B0GVB3 256 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 A0A1W2PPZ6 126 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 TRAPPC13A5PLN9 417 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 FAM220BPB1ANY3 271 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 RPL36A-HNRNPH2H7BZ11 118 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 KPNA4O00629 521 aaPredicted RBP8.88□□□□□ -0.99
SF3A3-204ENST00000462258 SLC22A2O15244 555 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 SERPINI2O75830 405 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 LYPD3O95274 346 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 NPPAP01160 153 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 CD8AP01732 235 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 THY1P04216 161 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 HLA-DOBP13765 273 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 FABP6P51161 128 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 TUBA1BP68363 451 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 TUBA4AP68366 448 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 PMS2P3Q13401 168 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 CLEC12BQ2HXU8 276 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 CEACAM16Q2WEN9 425 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 LRRC23Q53EV4 343 aaPredicted RBP8.88□□□□□ -0.99
SF3A3-204ENST00000462258 CARD17Q5XLA6 110 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 ZNF544Q6NX49 715 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 ANKRD16Q6P6B7 361 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 TTC33Q6PID6 262 aaPredicted RBP8.88□□□□□ -0.99
SF3A3-204ENST00000462258 LINC00114Q6XXX2 140 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 TUBA1AQ71U36 451 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 TSPYL5Q86VY4 417 aaPredicted RBP8.88□□□□□ -0.99
SF3A3-204ENST00000462258 ANKK1Q8NFD2 765 aa8.88□□□□□ -0.99
SF3A3-204ENST00000462258 OR5J2Q8NH18 312 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms