RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 RNASEH2BQ5TBB1 312 aaKnown RBP4.16□□□□□ -1.74
COPS3-204ENST00000462236 ARMC3Q5W041 872 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 RUSC1-AS1Q66K80 236 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 DUPD1Q68J44 220 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 TIGD3Q6B0B8 471 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 UGT3A1Q6NUS8 523 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 SBSNQ6UWP8 590 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 ZNF771Q7L3S4 317 aaPredicted RBP4.16□□□□□ -1.74
COPS3-204ENST00000462236 ZNF550Q7Z398 422 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 KLHDC8AQ8IYD2 350 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 GCNT2Q8N0V5 402 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 OR2AJ1Q8NGZ0 328 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 SPPL2AQ8TCT8 520 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 SNF8Q96H20 258 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 SENP5Q96HI0 755 aaPredicted RBP4.16□□□□□ -1.74
COPS3-204ENST00000462236 RILPQ96NA2 401 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 GPR21Q99679 349 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 DOHHQ9BU89 302 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 ABHD6Q9BV23 337 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 BEX2Q9BXY8 128 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 OR2B2Q9GZK3 357 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 OR8D2Q9GZM6 311 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 IL22Q9GZX6 179 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 RHBGQ9H310 441 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 DPAGT1Q9H3H5 408 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 NHEJ1Q9H9Q4 299 aaPredicted RBP4.16□□□□□ -1.74
COPS3-204ENST00000462236 PELI2Q9HAT8 420 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 PARVBQ9HBI1 364 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 INTS10Q9NVR2 710 aaKnown RBP4.16□□□□□ -1.74
COPS3-204ENST00000462236 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.16□□□□□ -1.74
COPS3-204ENST00000462236 RYR3Q15413 4870 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 PLXNB1O43157 2135 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 BTNL10A8MVZ5 291 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 B4DXG7 233 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 GOLGA8KD6RF30 607 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 E5RI56 91 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 GOLGA8TH3BQL2 631 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 PLOD2O00469 737 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 EMC8O43402 210 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 FGF17O60258 216 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 LMX1BO60663 402 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 SCELO95171 688 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 SNX4O95219 450 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 GAS8O95995 478 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 C8GP07360 202 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 CCDC175P0C221 793 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 IGHV4-31P0DP07 118 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 POU2F1P14859 743 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 TBXA2RP21731 343 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 GABRA5P31644 462 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 STIP1P31948 543 aaKnown RBP4.15□□□□□ -1.75
COPS3-204ENST00000462236 PCGF2P35227 344 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 RPL22P35268 128 aaKnown RBP4.15□□□□□ -1.75
COPS3-204ENST00000462236 HNF4AP41235 474 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 NPY2RP49146 381 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 CASP9P55211 416 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 CLDN15P56746 228 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 UBASH3AP57075 661 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 STXBP1P61764 594 aaKnown RBP4.15□□□□□ -1.75
COPS3-204ENST00000462236 BTN3A2P78410 334 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 ARL16Q0P5N6 197 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 SERTAD2Q14140 314 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 EFTUD2Q15029 972 aaKnown RBP eCLIP4.15□□□□□ -1.752e-6■■■■■ 32.8
COPS3-204ENST00000462236 PGGHGQ32M88 737 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 TTLL9Q3SXZ7 439 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 TOR1AIP1Q5JTV8 583 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 SCIMPQ6UWF3 145 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 CES3Q6UWW8 571 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 PPP1R21Q6ZMI0 780 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 DGAT2L6Q6ZPD8 337 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 NUDT13Q86X67 352 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 CPNE9Q8IYJ1 553 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 ARIH2OSQ8N7S6 290 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 GPATCH11Q8N954 259 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 BBOF1Q8ND07 529 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 SGMS2Q8NHU3 365 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 RNF138Q8WVD3 245 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 SLC5A11Q8WWX8 675 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 UCN3Q969E3 161 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 ADIPOR1Q96A54 375 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 PYCR2Q96C36 320 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 C11orf24Q96F05 449 aaPredicted RBP4.15□□□□□ -1.75
COPS3-204ENST00000462236 PGM2Q96G03 612 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 HES6Q96HZ4 224 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 ST6GAL2Q96JF0 529 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 ZNF583Q96ND8 569 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 NDNQ99608 321 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 TRAF4Q9BUZ4 470 aaPredicted RBP4.15□□□□□ -1.75
COPS3-204ENST00000462236 WWTR1Q9GZV5 400 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 SHARPINQ9H0F6 387 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 OPN3Q9H1Y3 402 aaPredicted RBP4.15□□□□□ -1.75
COPS3-204ENST00000462236 MMP28Q9H239 520 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 OPA3Q9H6K4 179 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 NT5DC2Q9H857 520 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 LYRM4Q9HD34 91 aa4.15□□□□□ -1.75
COPS3-204ENST00000462236 MRPS33Q9Y291 106 aaKnown RBP4.15□□□□□ -1.75
COPS3-204ENST00000462236 MRPS18CQ9Y3D5 142 aaKnown RBP4.15□□□□□ -1.75
COPS3-204ENST00000462236 SPIN1Q9Y657 262 aaPredicted RBP4.15□□□□□ -1.75
COPS3-204ENST00000462236 A0A0G2JN53 185 aa4.14□□□□□ -1.75
COPS3-204ENST00000462236 MACROD2A1Z1Q3 448 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms