RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 RBM4Q9BWF3 364 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-207ENST00000461228 ZNF416Q9BWM5 594 aa12.54□□□□□ -0.4
DNMT3A-207ENST00000461228 GPR35Q9HC97 309 aa12.54□□□□□ -0.4
DNMT3A-207ENST00000461228 RLIMQ9NVW2 624 aa12.54□□□□□ -0.4
DNMT3A-207ENST00000461228 B3GNT2Q9NY97 397 aa12.54□□□□□ -0.4
DNMT3A-207ENST00000461228 IFT52Q9Y366 437 aa12.54□□□□□ -0.4
DNMT3A-207ENST00000461228 WNK2Q9Y3S1 2297 aa12.54□□□□□ -0.4
DNMT3A-207ENST00000461228 ZNF503-AS2A6NEH8 195 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 ENTPD5O75356 428 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 VENTXO95231 258 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 CELA3BP08861 270 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 SAGP10523 405 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 BMP2P12643 396 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 ZNF14P17017 642 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 TMEM33P57088 247 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 ARF1P84077 181 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 EGR4Q05215 589 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 LGALS3BPQ08380 585 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 TRIP10Q15642 601 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 FXNQ16595 210 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 ELFN2Q5R3F8 820 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 NET1Q7Z628 596 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 HMGN2P46Q86SG4 172 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 MDP1Q86V88 176 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 NUDCD3Q8IVD9 361 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 SCAIQ8N9R8 606 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 RDH5Q92781 318 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 SLC38A4Q969I6 547 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 SLC41A3Q96GZ6 507 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 ZNF75AQ96N20 296 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 OR2M2Q96R28 347 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 SORT1Q99523 831 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 CACYBPQ9HB71 228 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 CRLF2Q9HC73 371 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 BCL2L10Q9HD36 194 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 ZNF346Q9UL40 294 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 CORINQ9Y5Q5 1042 aa12.53□□□□□ -0.4
DNMT3A-207ENST00000461228 A0A096LPE4 126 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 A0A0G2JPF8 293 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 A0A1W2PPZ6 126 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 HNRNPCL2B2RXH8 293 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 HNRNPCL3B7ZW38 293 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 NR5A2O00482 541 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 HNRNPCL1O60812 293 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 SPAG7O75391 227 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 RP2O75695 350 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 PNPP00491 289 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 IL6P05231 212 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 ALDOCP09972 364 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 HNRNPCL4P0DMR1 293 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 ZNF35P13682 527 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 GPR6P46095 362 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 CLDN17P56750 224 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 ACTG1P63261 375 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 GSG1Q2KHT4 349 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 CEACAM16Q2WEN9 425 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 PDCD4Q53EL6 469 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 COX20Q5RI15 118 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 FAM91A1Q658Y4 838 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 SHQ1Q6PI26 577 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 CADM2Q8N3J6 435 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 CLDND2Q8NHS1 167 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 SLC38A5Q8WUX1 472 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 TEX37Q96LM6 180 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 OR52E6Q96RD3 313 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 METTL17Q9H7H0 456 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 HIF1ANQ9NWT6 349 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 SLC7A8Q9UHI5 535 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 CHST2Q9Y4C5 530 aa12.52□□□□□ -0.41
DNMT3A-207ENST00000461228 TMEM247A6NEH6 219 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 TRIM77I1YAP6 450 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 J3QLI3 93 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 RFXANKO14593 260 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 ITM2AO43736 263 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 BCHEP06276 602 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 ADRA2AP08913 450 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 GKN3PP0CG01 181 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 GAAP10253 952 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 NCF2P19878 526 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 GATA3P23771 443 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 CDKN2CP42773 168 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 DSTNP60981 165 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 TUBA1BP68363 451 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 TUBA4AP68366 448 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 NPRL3Q12980 569 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 BNIP2Q12982 314 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 FADDQ13158 208 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 CHI3L2Q15782 390 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 FAM209AQ5JX71 171 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 PRR31Q5SQ13 230 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 SWT1Q5T5J6 900 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 TUBA1AQ71U36 451 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 SERPINA11Q86U17 422 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 VRK2Q86Y07 508 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 DNAJA4Q8WW22 397 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 TRIM44Q96DX7 344 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 ZBTB18Q99592 522 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 NUF2Q9BZD4 464 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 MRPL37Q9BZE1 423 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 EVA1AQ9H8M9 152 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms