RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 HPNP05981 417 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 ZNF836Q6ZNA1 936 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 OR13C9Q8NGT0 318 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 DTD2Q96FN9 168 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 SLC35E1Q96K37 410 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 SLC29A1Q99808 456 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 SEC22CQ9BRL7 303 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 UTP23Q9BRU9 249 aaKnown RBP8.36□□□□□ -1.07
BRCA1-205ENST00000461221 STARD5Q9NSY2 213 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 CHRNA9Q9UGM1 479 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 TMEM200CA6NKL6 621 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 SNAI1O95863 264 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-205ENST00000461221 THBS1P07996 1170 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 CTSAP10619 480 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 SSR4P51571 173 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 CLINT1Q14677 625 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 BTNL8Q6UX41 500 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 SYT9Q86SS6 491 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 CLDN22Q8N7P3 220 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 ATF6BQ99941 703 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 WDR83Q9BRX9 315 aaKnown RBP8.36□□□□□ -1.07
BRCA1-205ENST00000461221 LMAN1LQ9HAT1 526 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 SLC35D1Q9NTN3 355 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 RAB22AQ9UL26 194 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 GOLT1BQ9Y3E0 138 aa8.36□□□□□ -1.07
BRCA1-205ENST00000461221 TRAV36DV7A0A075B6V5 113 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 TGOLN2O43493 480 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 EIF1BO60739 113 aaKnown RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 PRAMEF4O60810 478 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 ETV1P50549 477 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 RPL11P62913 178 aaKnown RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 SIRPAP78324 504 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 ARHGAP11BQ3KRB8 267 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 VHLLQ6RSH7 139 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 MOB1BQ7L9L4 216 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 WDTC1Q8N5D0 677 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 NHLRC2Q8NBF2 726 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 OR2T11Q8NH01 316 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 LGALS14Q8TCE9 139 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 H1FXQ92522 213 aaKnown RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 MARC2Q969Z3 335 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 KCNJ15Q99712 375 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 FBXL4Q9UKA2 621 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 PRSS38A1L453 326 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 A6NIN4 97 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 CHEK1O14757 476 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 PRSS56P0CW18 603 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 OR8G3PP0DMU2 310 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 MAKP20794 623 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 HOXA11P31270 313 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 S100A11P31949 105 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 CSNK1DP48730 415 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 SOX4Q06945 474 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 HES1Q14469 280 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 FXNQ16595 210 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 IAH1Q2TAA2 248 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 STEAP1BQ6NZ63 245 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 MEX3DQ86XN8 651 aaKnown RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 ENTHD1Q8IYW4 607 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 ADGRF3Q8IZF5 1079 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 CISD2Q8N5K1 135 aaKnown RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 EID2Q8N6I1 236 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 NPWQ8N729 165 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 NUDT22Q9BRQ3 303 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 TMEM43Q9BTV4 400 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 ALG12Q9BV10 488 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 SORBS1Q9BX66 1292 aaKnown RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 NKX2-4Q9H2Z4 354 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 PLK3Q9H4B4 646 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 SLAMF7Q9NQ25 335 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 RBFOX1Q9NWB1 397 aaKnown RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 GAR1Q9NY12 217 aaKnown RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 FAM183AA6NL82 134 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 OR52A4PA6NMU1 304 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 NCR1O76036 304 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 F3P13726 295 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 SNRPBP14678 240 aaKnown RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 HTRA4P83105 476 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 HOXC5Q00444 222 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 PCK2Q16822 640 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 TMEM176BQ3YBM2 270 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 ESPNLQ6ZVH7 1005 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 ADGRE4PQ86SQ3 457 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 OR13C2Q8NGS9 318 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 ZNF778Q96MU6 729 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 FOXN4Q96NZ1 517 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 CD207Q9UJ71 328 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 SETD1AO15047 1707 aaKnown RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 XKRY2A2RUG3 117 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 ZNF587BE7ETH6 402 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 SELEP16581 610 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 ENPP1P22413 925 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 EPHA5P54756 1037 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 SPCS2Q15005 226 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 RTP2Q5QGT7 225 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 MRPL2Q5T653 305 aaKnown RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 ZNF626Q68DY1 528 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 LIPIQ6XZB0 460 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 GTF2H5Q6ZYL4 71 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 LMO3Q8TAP4 145 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms