RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 DEF8Q6ZN54 512 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 TGIF2LYQ8IUE0 185 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 WDR31Q8NA23 367 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 LILRB1Q8NHL6 650 aaPredicted RBP19.74■□□□□ 0.75
TRAF4-207ENST00000461195 TPD52L3Q96J77 140 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 ALKBH3Q96Q83 286 aaPredicted RBP19.74■□□□□ 0.75
TRAF4-207ENST00000461195 ZNF426Q9BUY5 554 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 SLC19A3Q9BZV2 496 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 GMPR2Q9P2T1 348 aaKnown RBP19.74■□□□□ 0.75
TRAF4-207ENST00000461195 NAV3Q8IVL0 2385 aa19.74■□□□□ 0.75
TRAF4-207ENST00000461195 NIPBLQ6KC79 2804 aaeCLIP19.74■□□□□ 0.752e-8■■■□□ 17.1
TRAF4-207ENST00000461195 TRAF3IP2O43734 574 aaPredicted RBP19.73■□□□□ 0.75
TRAF4-207ENST00000461195 SHOX2O60902 331 aaPredicted RBP19.73■□□□□ 0.75
TRAF4-207ENST00000461195 HPRP00739 348 aa19.73■□□□□ 0.75
TRAF4-207ENST00000461195 OR1E2P47887 323 aa19.73■□□□□ 0.75
TRAF4-207ENST00000461195 ZNF83P51522 516 aa19.73■□□□□ 0.75
TRAF4-207ENST00000461195 SELENOWP63302 87 aa19.73■□□□□ 0.75
TRAF4-207ENST00000461195 PUDPQ08623 228 aa19.73■□□□□ 0.75
TRAF4-207ENST00000461195 TMEM108Q6UXF1 575 aa19.73■□□□□ 0.75
TRAF4-207ENST00000461195 OR5J2Q8NH18 312 aa19.73■□□□□ 0.75
TRAF4-207ENST00000461195 LZICQ8WZA0 190 aa19.73■□□□□ 0.75
TRAF4-207ENST00000461195 BOD1Q96IK1 185 aa19.73■□□□□ 0.75
TRAF4-207ENST00000461195 PRSS27Q9BQR3 290 aa19.73■□□□□ 0.75
TRAF4-207ENST00000461195 ALG2Q9H553 416 aa19.73■□□□□ 0.75
TRAF4-207ENST00000461195 NOX1Q9Y5S8 564 aa19.73■□□□□ 0.75
TRAF4-207ENST00000461195 KPNA4O00629 521 aaPredicted RBP19.72■□□□□ 0.75
TRAF4-207ENST00000461195 PLPP3O14495 311 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 DYNC1I1O14576 645 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 GSTA4O15217 222 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 OR5F1O95221 314 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 CH25HO95992 272 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 PRPS1P60891 318 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 ADAM8P78325 824 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 NKX6-1P78426 367 aaPredicted RBP19.72■□□□□ 0.75
TRAF4-207ENST00000461195 ZNF74Q16587 644 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 KRTAP21-3Q3LHN1 58 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 ZNF672Q499Z4 452 aaPredicted RBP19.72■□□□□ 0.75
TRAF4-207ENST00000461195 HMBOX1Q6NT76 420 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 KLHL24Q6TFL4 600 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 LINGO2Q7L985 606 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 LRRC75A-AS1Q8N1F1 130 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 KBTBD8Q8NFY9 601 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 FBXW5Q969U6 566 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 OR2M2Q96R28 347 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 FKRPQ9H9S5 495 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 NANSQ9NR45 359 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 RIMS3Q9UJD0 308 aa19.72■□□□□ 0.75
TRAF4-207ENST00000461195 MAGED1Q9Y5V3 778 aaPredicted RBP19.72■□□□□ 0.75
TRAF4-207ENST00000461195 CADP27708 2225 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 CXCR6O00574 342 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 ABCD4O14678 606 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 OR6A2O95222 327 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 WNT11O96014 354 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 HLA-DOBP13765 273 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 AHCYP23526 432 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 PTAFRP25105 342 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 GSK3BP49841 420 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 PSME3P61289 254 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 ROR2Q01974 943 aaKnown RBP19.71■□□□□ 0.75
TRAF4-207ENST00000461195 POU3F1Q03052 451 aaPredicted RBP19.71■□□□□ 0.75
TRAF4-207ENST00000461195 PIN1Q13526 163 aaPredicted RBP19.71■□□□□ 0.75
TRAF4-207ENST00000461195 PXKQ7Z7A4 578 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 GPR137CQ8N3F9 429 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 PIK3C3Q8NEB9 887 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 ANKK1Q8NFD2 765 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 OR1K1Q8NGR3 316 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 TMEM171Q8WVE6 324 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 IGFBPL1Q8WX77 278 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 NEUROG1Q92886 237 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 RADILQ96JH8 1075 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 C1QTNF6Q9BXI9 259 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 ABCD2Q9UBJ2 740 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 MGAT4BQ9UQ53 548 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 ARL2BPQ9Y2Y0 163 aa19.71■□□□□ 0.75
TRAF4-207ENST00000461195 RPL36A-HNRNPH2H7BZ11 118 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 M0R1B8 84 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 TMCC2O75069 709 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 ADORA3P0DMS8 318 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 THRBP10828 461 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 CD40P25942 277 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 RBM34P42696 430 aaKnown RBP19.7■□□□□ 0.74
TRAF4-207ENST00000461195 SH3BGRP55822 239 aaPredicted RBP19.7■□□□□ 0.74
TRAF4-207ENST00000461195 SLC25A3Q00325 362 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 HIKESHIQ53FT3 197 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 SHEQ5VZ18 495 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 PIGWQ7Z7B1 504 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 NKAIN4Q8IVV8 208 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 TMEM123Q8N131 208 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 KCTD14Q9BQ13 255 aaPredicted RBP19.7■□□□□ 0.74
TRAF4-207ENST00000461195 OBP2BQ9NPH6 170 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 ZNF229Q9UJW7 825 aa19.7■□□□□ 0.74
TRAF4-207ENST00000461195 SHISA9B4DS77 424 aa19.69■□□□□ 0.74
TRAF4-207ENST00000461195 ARHGEF9O43307 516 aa19.69■□□□□ 0.74
TRAF4-207ENST00000461195 HIST1H2ABP04908 130 aa19.69■□□□□ 0.74
TRAF4-207ENST00000461195 CD99P14209 185 aa19.69■□□□□ 0.74
TRAF4-207ENST00000461195 TBRG1Q3YBR2 411 aa19.69■□□□□ 0.74
TRAF4-207ENST00000461195 ANKRD16Q6P6B7 361 aa19.69■□□□□ 0.74
TRAF4-207ENST00000461195 NHLRC1Q6VVB1 395 aa19.69■□□□□ 0.74
TRAF4-207ENST00000461195 HIST3H2AQ7L7L0 130 aa19.69■□□□□ 0.74
TRAF4-207ENST00000461195 PIAS4Q8N2W9 510 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms