RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 ZNF439Q8NDP4 499 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 GPR62Q9BZJ7 368 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 TRPM3Q9HCF6 1732 aaPredicted RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 GPR52Q9Y2T5 361 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 NOSIPQ9Y314 301 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 SGK494L7N484 410 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 GPR32O75388 356 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 RPS17P08708 135 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 CTSAP10619 480 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 TPMTP51580 245 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 YPEL5P62699 121 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 ZNF765Q7L2R6 523 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 FAM217AQ8IXS0 508 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 TCEAL8Q8IYN2 117 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 CD200R1Q8TD46 325 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 PAQR8Q8TEZ7 354 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 ZNF583Q96ND8 569 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 PEBP4Q96S96 227 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 IKZF4Q9H2S9 585 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 PIGMQ9H3S5 423 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 DNMT3BQ9UBC3 853 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 FZD9O00144 591 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 GSTP1P09211 210 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 OR10J4P0C629 311 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 M6PRP20645 277 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 POU3F1Q03052 451 aaPredicted RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 TNK1Q13470 666 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 GGTA1PQ4G0N0 100 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 TP53I3Q53FA7 332 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 RPS26P11Q5JNZ5 115 aaPredicted RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 FRMPD2BQ6IN97 320 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 PET117Q6UWS5 81 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 FAM57BQ71RH2 274 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 NKX2-4Q9H2Z4 354 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 INTS6Q9UL03 887 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 PSAT1Q9Y617 370 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 GPR171O14626 319 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 SIM1P81133 766 aaPredicted RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 MBTPS1Q14703 1052 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 C19orf35Q6ZS72 473 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 TMEM200AQ86VY9 491 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 MFSD9Q8NBP5 474 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 OR51A2Q8NGJ7 313 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 OR2A12Q8NGT7 310 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 ZMYND19Q96E35 227 aaPredicted RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 NRXN3Q9Y4C0 1643 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 RPS10-NUDT3A0A1W2PQS6 291 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 H3BNC9 293 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 SDC3O75056 442 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 CNIH1O95406 144 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 ANXA7P20073 488 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 POU3F3P20264 500 aaPredicted RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 CA5AP35218 305 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 RPS10P46783 165 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 RPL11P62913 178 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 PPP1R8Q12972 351 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 OGFOD3Q6PK18 319 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 ZFPM2Q8WW38 1151 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 PIGCQ92535 297 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 RPH3ALQ9UNE2 315 aa8.28□□□□□ -1.08
SHROOM4-203ENST00000460112 TMEM200CA6NKL6 621 aa8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 LAMP1P11279 417 aa8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 JUNBP17275 347 aaPredicted RBP8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 DPP4P27487 766 aa8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 MRPS21P82921 87 aaKnown RBP8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 DUSP6Q16828 381 aa8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 ZNF691Q5VV52 312 aa8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 FAM111BQ6SJ93 734 aa8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 BAGE3Q86Y29 109 aa8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 BAGE2Q86Y30 109 aa8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 CNIH4Q9P003 139 aa8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 ADAMTS6Q9UKP5 1117 aa8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 YARS2Q9Y2Z4 477 aaKnown RBP8.27□□□□□ -1.08
SHROOM4-203ENST00000460112 UBL3O95164 117 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 RAB38P57729 211 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 UBE2G1P62253 170 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 DCDP81605 110 aaKnown RBP8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 MRPS34P82930 218 aaKnown RBP8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 C1orf61Q13536 156 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 VASNQ6EMK4 673 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 NSUN5Q96P11 429 aaKnown RBP8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 IL37Q9NZH6 218 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 KCMF1Q9P0J7 381 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 EPHA5P54756 1037 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 MTCP1P56278 107 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 C15orf39Q6ZRI6 1047 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 OR8J2Q8NGG1 315 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 WDR83Q9BRX9 315 aaKnown RBP8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 VSX1Q9NZR4 365 aaPredicted RBP8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 ZNF814B7Z6K7 855 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 GGT5P36269 586 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 OR4D1Q15615 310 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 PTRH1Q86Y79 214 aaKnown RBP8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 FUBP1Q96AE4 644 aaKnown RBP8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 SLC46A1Q96NT5 459 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 ABHD6Q9BV23 337 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 C1orf198Q9H425 327 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 IFT22Q9H7X7 185 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 C12orf10Q9HB07 376 aa8.27□□□□□ -1.09
SHROOM4-203ENST00000460112 SNED1Q8TER0 1413 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms