RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 C10orf82Q8WW14 230 aa18.24■□□□□ 0.51
SRM-202ENST00000459997 BCL2L2Q92843 193 aaPredicted RBP18.24■□□□□ 0.51
SRM-202ENST00000459997 SAR1AQ9NR31 198 aa18.24■□□□□ 0.51
SRM-202ENST00000459997 MOKQ9UQ07 419 aa18.24■□□□□ 0.51
SRM-202ENST00000459997 IGHV1-18A0A0C4DH31 117 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 M0QX08 132 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 FBP2O00757 339 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 NUDT6P53370 316 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 SH3BGRP55822 239 aaPredicted RBP18.23■□□□□ 0.51
SRM-202ENST00000459997 PPP2R2BQ00005 443 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 KLF10Q13118 480 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 MFSD13AQ14CX5 517 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 DUSP7Q16829 419 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 SWT1Q5T5J6 900 aaKnown RBP18.23■□□□□ 0.51
SRM-202ENST00000459997 DNM1P46Q6ZS02 220 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 GPR137CQ8N3F9 429 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 ADPRHL1Q8NDY3 354 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 OR6S1Q8NH40 331 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 SLC38A2Q96QD8 506 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 MCHR1Q99705 422 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 ARHGDIGQ99819 225 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 ASPNQ9BXN1 380 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 KAT8Q9H7Z6 458 aaKnown RBP18.23■□□□□ 0.51
SRM-202ENST00000459997 CORINQ9Y5Q5 1042 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 TLN2Q9Y4G6 2542 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 PLCE1Q9P212 2302 aa18.23■□□□□ 0.51
SRM-202ENST00000459997 ARPC4-TTLL3A0A0A6YYG9 625 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 LOC102725191A0A1B0GVB3 256 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 INAFM1C9JVW0 142 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 TRAF3IP2O43734 574 aaPredicted RBP18.22■□□□□ 0.51
SRM-202ENST00000459997 AKAP8O43823 692 aaKnown RBP18.22■□□□□ 0.51
SRM-202ENST00000459997 BGLAPP02818 100 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 GYS2P54840 703 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 TUBA1BP68363 451 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 TUBA4AP68366 448 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 TUBA1AQ71U36 451 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 SLC30A8Q8IWU4 369 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 UEVLDQ8IX04 471 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 C10orf53Q8N6V4 93 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 ANKK1Q8NFD2 765 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 GPR32P1Q8NGA4 272 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 MAGEE2Q8TD90 523 aaPredicted RBP18.22■□□□□ 0.51
SRM-202ENST00000459997 HTRA1Q92743 480 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 SLC41A3Q96GZ6 507 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 MOGAT1Q96PD6 335 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 OR2M2Q96R28 347 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 KCNS3Q9BQ31 491 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 TMEM43Q9BTV4 400 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 NELFAQ9H3P2 528 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 GPR35Q9HC97 309 aa18.22■□□□□ 0.51
SRM-202ENST00000459997 MS4A18H0YCH9 400 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 RPL36A-HNRNPH2H7BZ11 118 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 FMO6PO60774 539 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 HPRP00739 348 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 C8BP07358 591 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 PAX7P23759 505 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 APOBEC3AP31941 199 aaPredicted RBP18.21■□□□□ 0.51
SRM-202ENST00000459997 PCGF2P35227 344 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 SEC24CP53992 1094 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 ARF1P84077 181 aaKnown RBP18.21■□□□□ 0.51
SRM-202ENST00000459997 KRTAP1-1Q07627 177 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 PMS2P3Q13401 168 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 RAB35Q15286 201 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 NPTX1Q15818 432 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 MS4A18Q3C1V0 323 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 ZNF613Q6PF04 617 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 PATL1Q86TB9 770 aaKnown RBP18.21■□□□□ 0.51
SRM-202ENST00000459997 SCAIQ8N9R8 606 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 PIK3C3Q8NEB9 887 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 OR10A6Q8NH74 314 aa18.21■□□□□ 0.51
SRM-202ENST00000459997 VANGL1Q8TAA9 524 aaPredicted RBP18.21■□□□□ 0.51
SRM-202ENST00000459997 HEATR1Q9H583 2144 aaKnown RBP18.2■□□□□ 0.5
SRM-202ENST00000459997 CPSF4LA6NMK7 179 aaKnown RBP18.2■□□□□ 0.5
SRM-202ENST00000459997 LRRN3E7EW58 273 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 H7C417 338 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 CRYAAP02489 173 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 BMP4P12644 408 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 HLA-DOBP13765 273 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 POU3F1Q03052 451 aaPredicted RBP18.2■□□□□ 0.5
SRM-202ENST00000459997 CHRNB3Q05901 458 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 CEACAM16Q2WEN9 425 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 TRMT5Q32P41 509 aaKnown RBP18.2■□□□□ 0.5
SRM-202ENST00000459997 ENTPD8Q5MY95 495 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 CARD17Q5XLA6 110 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 TMEM123Q8N131 208 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 OR6T1Q8NGN1 323 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 SLC26A7Q8TE54 656 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 RHNO1Q9BSD3 238 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 KATNB1Q9BVA0 655 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 CRLF2Q9HC73 371 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 MRPL39Q9NYK5 338 aaKnown RBP18.2■□□□□ 0.5
SRM-202ENST00000459997 ARMCX1Q9P291 453 aa18.2■□□□□ 0.5
SRM-202ENST00000459997 HIVEP2P31629 2446 aa18.19■□□□□ 0.5
SRM-202ENST00000459997 M0R3G1 203 aa18.19■□□□□ 0.5
SRM-202ENST00000459997 CHP2O43745 196 aa18.19■□□□□ 0.5
SRM-202ENST00000459997 CECR9P0C854 216 aa18.19■□□□□ 0.5
SRM-202ENST00000459997 HOXB1P14653 301 aaPredicted RBP18.19■□□□□ 0.5
SRM-202ENST00000459997 CR1P17927 2039 aa18.19■□□□□ 0.5
SRM-202ENST00000459997 CD247P20963 164 aa18.19■□□□□ 0.5
SRM-202ENST00000459997 PUDPQ08623 228 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms