RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 SERTAD4Q9NUC0 356 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 F6UZH7 168 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 NUDT21O43809 227 aaKnown RBP9.06□□□□□ -0.96
UFD1-205ENST00000459854 BRINP1O60477 761 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 PAPLNO95428 1278 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 TMEM225BP0DP42 221 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 ACP5P13686 325 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 OPRD1P41143 372 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 STK19P49842 368 aaPredicted RBP9.06□□□□□ -0.96
UFD1-205ENST00000459854 HTR6P50406 440 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 FABP6P51161 128 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 C19orf57Q0VDD7 668 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 ZNF776Q68DI1 518 aaPredicted RBP9.06□□□□□ -0.96
UFD1-205ENST00000459854 WDR5BQ86VZ2 330 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 PELI3Q8N2H9 469 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 OR51Q1Q8NH59 317 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 ABHD4Q8TB40 342 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 PRTFDC1Q9NRG1 225 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 SLC39A9Q9NUM3 307 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 NDUFB11Q9NX14 153 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 ZNF337Q9Y3M9 751 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 TRAV20A0A0B4J274 112 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.06□□□□□ -0.96
UFD1-205ENST00000459854 CBY3A6NI87 242 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 NPIPA2E9PIF3 369 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 NPIPA3F8WFD2 350 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 SGK494L7N484 410 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 LINC00271P0C7V0 271 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 C8orf89P0DMQ9 161 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 NTSR1P30989 418 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 LIPAP38571 399 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 OLIG2Q13516 323 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 HSF5Q4G112 596 aaPredicted RBP9.06□□□□□ -0.96
UFD1-205ENST00000459854 CATSPEREQ5SY80 951 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 ZNF322Q6U7Q0 402 aaPredicted RBP9.06□□□□□ -0.96
UFD1-205ENST00000459854 FBXW12Q6X9E4 464 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 SLC39A7Q92504 469 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 CPNE4Q96A23 557 aaPredicted RBP9.06□□□□□ -0.96
UFD1-205ENST00000459854 YIPF6Q96EC8 236 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 FYTTD1Q96QD9 318 aaKnown RBP9.06□□□□□ -0.96
UFD1-205ENST00000459854 PLEKHA2Q9HB19 425 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 ARNT2Q9HBZ2 717 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 PRRC2BQ5JSZ5 2229 aaKnown RBP9.06□□□□□ -0.96
UFD1-205ENST00000459854 TNFP01375 233 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 TBPP20226 339 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 TNFRSF4P43489 277 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 TNK1Q13470 666 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 ARSIQ5FYB1 569 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 PODNL1Q6PEZ8 512 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 TRAPPC6BQ86SZ2 158 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 STPG2Q8N412 459 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 OR9A4Q8NGU2 314 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 CYB5D2Q8WUJ1 264 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 TOMM40LQ969M1 308 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 DDIT4LQ96D03 193 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 OR52D1Q9H346 318 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 METTL7AQ9H8H3 244 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 SLC7A7Q9UM01 511 aa9.06□□□□□ -0.96
UFD1-205ENST00000459854 YTHDF2Q9Y5A9 579 aaKnown RBP9.06□□□□□ -0.96
UFD1-205ENST00000459854 TCRBV5S1A1TA0A578 114 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 SLC9B1P1A6NJY1 282 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 LAMTOR5O43504 91 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 KLF8O95600 359 aaPredicted RBP9.05□□□□□ -0.96
UFD1-205ENST00000459854 GBAP04062 536 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 IL9P15248 144 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 BCKDHBP21953 392 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 ACTR1AP61163 376 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 SIRPAP78324 504 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 MRPS21P82921 87 aaKnown RBP9.05□□□□□ -0.96
UFD1-205ENST00000459854 TFF2Q03403 129 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 ZNF252P-AS1Q0IIN9 211 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 FAM185AQ8N0U4 392 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 KHSRPQ92945 711 aaKnown RBP eCLIP9.05□□□□□ -0.962e-12■■■□□ 15.4
UFD1-205ENST00000459854 APIPQ96GX9 242 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 ZNF583Q96ND8 569 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 SPOCK3Q9BQ16 436 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 LMAN1LQ9HAT1 526 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 MARCH4Q9P2E8 410 aaPredicted RBP9.05□□□□□ -0.96
UFD1-205ENST00000459854 GHRLQ9UBU3 117 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 STEAP1Q9UHE8 339 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 ELOA3CA0A087WX78 387 aaPredicted RBP9.05□□□□□ -0.96
UFD1-205ENST00000459854 OR5K4A6NMS3 321 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 SYT5O00445 386 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 SCAMP1O15126 338 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 TACR3P29371 465 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 HOXD11P31277 338 aaPredicted RBP9.05□□□□□ -0.96
UFD1-205ENST00000459854 SUMO1P63165 101 aaKnown RBP9.05□□□□□ -0.96
UFD1-205ENST00000459854 EBPQ15125 230 aaKnown RBP9.05□□□□□ -0.96
UFD1-205ENST00000459854 FXNQ16595 210 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 GLYR1Q49A26 553 aaPredicted RBP9.05□□□□□ -0.96
UFD1-205ENST00000459854 SLC35D3Q5M8T2 416 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 TMEM107Q6UX40 140 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 SYT13Q7L8C5 426 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 PPP1R35Q8TAP8 253 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 TANKQ92844 425 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 DDOQ99489 341 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 GABARAPL3Q9BY60 117 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 S1PR5Q9H228 398 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 TREX1Q9NSU2 369 aa9.05□□□□□ -0.96
UFD1-205ENST00000459854 SPATA6Q9NWH7 488 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms