RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 B2RBV5 119 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 ZNF587BE7ETH6 402 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 CH25HO95992 272 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 SERPINA1P01009 418 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 NCK1P16333 377 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 POU3F1Q03052 451 aaPredicted RBP18.23■□□□□ 0.51
VARS-218ENST00000459667 TESK1Q15569 626 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 SPATS1Q496A3 300 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 NCMAPQ5T1S8 102 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 CBLL1Q75N03 491 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 LURAP1LQ8IV03 231 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 NKAIN4Q8IVV8 208 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 DEFB107AQ8IZN7 70 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 TMEM255BQ8WV15 326 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 PRRC1Q96M27 445 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 CDRT15Q96T59 188 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 TMEM204Q9BSN7 226 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 FKRPQ9H9S5 495 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 RPS6KA6Q9UK32 745 aa18.23■□□□□ 0.51
VARS-218ENST00000459667 A0A1W2PR80 420 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 PLPP3O14495 311 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 SLC43A1O75387 559 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 UPK3AO75631 287 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 ZNF432O94892 652 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 PLAUP00749 431 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 IFNW1P05000 195 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 THRBP10828 461 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 HLA-DOBP13765 273 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 HSD17B1P14061 328 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 CDH2P19022 906 aaPredicted RBP18.22■□□□□ 0.51
VARS-218ENST00000459667 AHCYP23526 432 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 RBM34P42696 430 aaKnown RBP18.22■□□□□ 0.51
VARS-218ENST00000459667 FOXD4Q12950 439 aaPredicted RBP18.22■□□□□ 0.51
VARS-218ENST00000459667 ACKR1Q16570 336 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 IFI44LQ53G44 452 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 FKBP9P1Q75LS8 142 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 C17orf78Q8N4C9 275 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 RNF148Q8N7C7 305 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 GEMIN6Q8WXD5 167 aaKnown RBP18.22■□□□□ 0.51
VARS-218ENST00000459667 MBD6Q96DN6 1003 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 HSH2DQ96JZ2 352 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 FOXC2Q99958 501 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 LINC00470Q9BZP3 86 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 MEPEQ9NQ76 525 aaPredicted RBP18.22■□□□□ 0.51
VARS-218ENST00000459667 NANSQ9NR45 359 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 NPAP1Q9NZP6 1156 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 EGFL7Q9UHF1 273 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 MAGEL2Q9UJ55 1249 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 RNF115Q9Y4L5 304 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 NOX1Q9Y5S8 564 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 SLC25A15Q9Y619 301 aa18.22■□□□□ 0.51
VARS-218ENST00000459667 RAI1Q7Z5J4 1906 aaPredicted RBP18.21■□□□□ 0.51
VARS-218ENST00000459667 CLOCKO15516 846 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 SERPINI2O75830 405 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 OR6A2O95222 327 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 CD3EP07766 207 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 ADORA3P0DMS8 318 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 UMPSP11172 480 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 CD53P19397 219 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 HOXC12P31275 282 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 UGT2B15P54855 530 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 BSPH1Q075Z2 132 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 GLYATQ6IB77 296 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 LINGO2Q7L985 606 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 TRPM8Q7Z2W7 1104 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 PFN4Q8NHR9 129 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 TMEM239Q8WW34 195 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 OR2M2Q96R28 347 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 SLC17A5Q9NRA2 495 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 ZNF229Q9UJW7 825 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 A4GNTQ9UNA3 340 aa18.21■□□□□ 0.51
VARS-218ENST00000459667 DPRXA6NFQ7 191 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 C11orf98E9PRG8 122 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 MT-ND1P03886 318 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 TCN1P20061 433 aaPredicted RBP18.2■□□□□ 0.5
VARS-218ENST00000459667 YAP1P46937 504 aaKnown RBP18.2■□□□□ 0.5
VARS-218ENST00000459667 ST3GAL3Q11203 375 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 DEFB113Q30KQ7 82 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 HMBOX1Q6NT76 420 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 C20orf204Q6ZNR8 217 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 SLC46A3Q7Z3Q1 461 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 PXKQ7Z7A4 578 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 TMEM123Q8N131 208 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 ARHGAP24Q8N264 748 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 GPR137CQ8N3F9 429 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 LRRC17Q8N6Y2 441 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 PIK3C3Q8NEB9 887 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 HS6ST2Q96MM7 605 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 ALPK1Q96QP1 1244 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 MED29Q9NX70 200 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 SAMD4AQ9UPU9 718 aaKnown RBP18.2■□□□□ 0.5
VARS-218ENST00000459667 AMDHD2Q9Y303 409 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 SNX13Q9Y5W8 968 aa18.2■□□□□ 0.5
VARS-218ENST00000459667 HIST1H2ABP04908 130 aa18.19■□□□□ 0.5
VARS-218ENST00000459667 ASAH2BP0C7U1 165 aa18.19■□□□□ 0.5
VARS-218ENST00000459667 ROR2Q01974 943 aaKnown RBP18.19■□□□□ 0.5
VARS-218ENST00000459667 CARD17Q5XLA6 110 aa18.19■□□□□ 0.5
VARS-218ENST00000459667 KLHL24Q6TFL4 600 aa18.19■□□□□ 0.5
VARS-218ENST00000459667 HIST3H2AQ7L7L0 130 aa18.19■□□□□ 0.5
VARS-218ENST00000459667 NANOGNBQ7Z5D8 188 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms