RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 FXNQ16595 210 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 HMBOX1Q6NT76 420 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 C22orf34Q6ZV56 151 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 RRM2BQ7LG56 351 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 TSPYL5Q86VY4 417 aaPredicted RBP14.23□□□□□ -0.13
CD28-203ENST00000458610 NKAIN4Q8IVV8 208 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 CDK20Q8IZL9 346 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 RNF113BQ8IZP6 322 aaKnown RBP14.23□□□□□ -0.13
CD28-203ENST00000458610 OFCC1Q8IZS5 231 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 GPR137CQ8N3F9 429 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 POP5Q969H6 163 aaKnown RBP14.23□□□□□ -0.13
CD28-203ENST00000458610 MCUR1Q96AQ8 359 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 ADAD1Q96M93 576 aaKnown RBP14.23□□□□□ -0.13
CD28-203ENST00000458610 NSMCE2Q96MF7 247 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 ANKRD19PQ9H560 264 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 B3GAT2Q9NPZ5 323 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 SEC14L4Q9UDX3 406 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 A4GNTQ9UNA3 340 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 MAGED1Q9Y5V3 778 aaPredicted RBP14.23□□□□□ -0.13
CD28-203ENST00000458610 SNX13Q9Y5W8 968 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 ENPP4Q9Y6X5 453 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.22□□□□□ -0.13
CD28-203ENST00000458610 PDLIM1O00151 329 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 WNT11O96014 354 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 SH3BGRP55822 239 aaPredicted RBP14.22□□□□□ -0.13
CD28-203ENST00000458610 POU3F1Q03052 451 aaPredicted RBP14.22□□□□□ -0.13
CD28-203ENST00000458610 KLHL17Q6TDP4 642 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 KLHL24Q6TFL4 600 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 NANOGNBQ7Z5D8 188 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 TMEM255BQ8WV15 326 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 LIPHQ8WWY8 451 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 PLPPR2Q96GM1 343 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 PYURFQ96I23 114 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 LRR1Q96L50 414 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 PLEKHF2Q9H8W4 249 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 OBP2BQ9NPH6 170 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 ST6GALNAC2Q9UJ37 374 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 AMDHD2Q9Y303 409 aa14.22□□□□□ -0.13
CD28-203ENST00000458610 CELSR2Q9HCU4 2923 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 LRRN3E7EW58 273 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 RPL36A-HNRNPH2H7BZ11 118 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 RNF13O43567 381 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 TRAF3IP2O43734 574 aaPredicted RBP14.21□□□□□ -0.13
CD28-203ENST00000458610 OR7A10O76100 309 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 ZNF432O94892 652 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 RAF1P04049 648 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 CD3EP07766 207 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 ITGA5P08648 1049 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 ASAH2BP0C7U1 165 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 HOXB1P14653 301 aaPredicted RBP14.21□□□□□ -0.13
CD28-203ENST00000458610 RHCEP18577 417 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 PTNP21246 168 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 YAP1P46937 504 aaKnown RBP14.21□□□□□ -0.13
CD28-203ENST00000458610 SMIM11AP58511 58 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 PRPS1P60891 318 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 KEAP1Q14145 624 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 TRPM8Q7Z2W7 1104 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 HDDC2Q7Z4H3 204 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 FAM156AQ8NDB6 213 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 BOD1Q96IK1 185 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 C1orf21Q9H246 121 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 MUC13Q9H3R2 512 aa14.21□□□□□ -0.13
CD28-203ENST00000458610 MOV10Q9HCE1 1003 aaKnown RBP14.21□□□□□ -0.13
CD28-203ENST00000458610 MEPEQ9NQ76 525 aaPredicted RBP14.21□□□□□ -0.13
CD28-203ENST00000458610 SLC35F4A4IF30 521 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 C11orf98E9PRG8 122 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 BLOC1S5-TXNDC5H3BN57 136 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 UPK3AO75631 287 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 STAMBPO95630 424 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 HPRP00739 348 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 UGT2B15P54855 530 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 FOXD4Q12950 439 aaPredicted RBP14.2□□□□□ -0.14
CD28-203ENST00000458610 ANKDD1AQ495B1 522 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 NCMAPQ5T1S8 102 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 C9orf135Q5VTT2 229 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 PAMR1Q6UXH9 720 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 ZNF730Q6ZMV8 503 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 LSRQ86X29 649 aaPredicted RBP14.2□□□□□ -0.14
CD28-203ENST00000458610 RBM15BQ8NDT2 890 aaKnown RBP14.2□□□□□ -0.14
CD28-203ENST00000458610 OR6N1Q8NGY5 312 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 ACOT11Q8WXI4 607 aaPredicted RBP14.2□□□□□ -0.14
CD28-203ENST00000458610 RADILQ96JH8 1075 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 OR2M2Q96R28 347 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 KRCC1Q9NPI7 259 aaPredicted RBP14.2□□□□□ -0.14
CD28-203ENST00000458610 SLC17A5Q9NRA2 495 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 TAS2R5Q9NYW4 299 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 STX18Q9P2W9 335 aaKnown RBP14.2□□□□□ -0.14
CD28-203ENST00000458610 ITGB1BP2Q9UKP3 347 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 PRPF19Q9UMS4 504 aaKnown RBP14.2□□□□□ -0.14
CD28-203ENST00000458610 MGAT4BQ9UQ53 548 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 ADGRG4Q8IZF6 3080 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 ABCA12Q86UK0 2595 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 ITPR2Q14571 2701 aa14.2□□□□□ -0.14
CD28-203ENST00000458610 A0A1W2PRG6 482 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 ARPC2O15144 300 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 SIAH2O43255 324 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 SERPINI2O75830 405 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 BCL10O95999 233 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 H1F0P07305 194 aaKnown RBP14.19□□□□□ -0.14
CD28-203ENST00000458610 IFI30P13284 250 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms