RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 MAS1P04201 325 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 POU3F2P20265 443 aaPredicted RBP12.91□□□□□ -0.34
SCFD1-203ENST00000458591 PSMB1P20618 241 aaKnown RBP12.91□□□□□ -0.34
SCFD1-203ENST00000458591 C4BPBP20851 252 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 CDK2P24941 298 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 TAGLNQ01995 201 aaKnown RBP12.91□□□□□ -0.34
SCFD1-203ENST00000458591 DYRK1AQ13627 763 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 GGTLC2Q14390 218 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 CBLN3Q6UW01 205 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 SLC22A18ASQ8N1D0 253 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 C3orf49Q96BT1 292 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 MSANTD3Q96H12 275 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 MRGPRX1Q96LB2 322 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 ALG12Q9BV10 488 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 PBX4Q9BYU1 374 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 ZNF275Q9NSD4 429 aaPredicted RBP12.91□□□□□ -0.34
SCFD1-203ENST00000458591 ZNF224Q9NZL3 707 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 FOXJ3Q9UPW0 622 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 ERVK-19Q9WJR5 959 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 YBX2Q9Y2T7 364 aaKnown RBP12.91□□□□□ -0.34
SCFD1-203ENST00000458591 RWDD3Q9Y3V2 267 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 MAB21L2Q9Y586 359 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 SLCO1B1Q9Y6L6 691 aa12.91□□□□□ -0.34
SCFD1-203ENST00000458591 A0A087WUJ7 227 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 MEIS3P1A6NDR6 274 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 C2orf74A8MZ97 194 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 TEX46H3BTG2 121 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 KHNYNO15037 678 aaKnown RBP12.9□□□□□ -0.34
SCFD1-203ENST00000458591 AK1P00568 194 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 CT45A8P0DMV1 189 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 CT45A9P0DMV2 189 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 UBL4AP11441 157 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 LCN1P31025 176 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 RBM34P42696 430 aaKnown RBP12.9□□□□□ -0.34
SCFD1-203ENST00000458591 P2RX1P51575 399 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 CCR4P51679 360 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 RAB38P57729 211 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 TSPAN5P62079 268 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 STX4Q12846 297 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 CD226Q15762 336 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 AANATQ16613 207 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 CT45A2Q5DJT8 189 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 TCTE1Q5JU00 501 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 PWWP2BQ6NUJ5 590 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 TMEM92Q6UXU6 159 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 GLRX5Q86SX6 157 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 GRAMD2AQ8IUY3 354 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 C7orf61Q8IZ16 206 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 ZNF321PQ8N8H1 164 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 POMGNT2Q8NAT1 580 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 C1orf216Q8TAB5 229 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 RBM18Q96H35 190 aaKnown RBP12.9□□□□□ -0.34
SCFD1-203ENST00000458591 GABRG3Q99928 467 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 LMF2Q9BU23 707 aaKnown RBP12.9□□□□□ -0.34
SCFD1-203ENST00000458591 NMNAT2Q9BZQ4 307 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 NOX3Q9HBY0 568 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.9□□□□□ -0.34
SCFD1-203ENST00000458591 FRRS1LQ9P0K9 344 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 MGAT4CQ9UBM8 478 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 MRM2Q9UI43 246 aaKnown RBP12.9□□□□□ -0.34
SCFD1-203ENST00000458591 ZNF281Q9Y2X9 895 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 FANCMQ8IYD8 2048 aa12.9□□□□□ -0.34
SCFD1-203ENST00000458591 TRAV8-7A0A075B6U6 113 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 A0A0J9YY10 115 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 A8MUA0 341 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 AIPO00170 330 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 LTBQ06643 244 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 C2orf68Q2NKX9 166 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 DPY19L2P2Q6ZN68 376 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 SLC51BQ86UW2 128 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 BCORP1Q8N888 145 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 C16orf52Q8NHV5 167 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 PHOSPHO2Q8TCD6 241 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 ADAD1Q96M93 576 aaKnown RBP12.89□□□□□ -0.35
SCFD1-203ENST00000458591 TWSG1Q9GZX9 223 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 AKAP7Q9P0M2 348 aaPredicted RBP12.89□□□□□ -0.35
SCFD1-203ENST00000458591 PIPOXQ9P0Z9 390 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 RABL2AQ9UBK7 228 aaPredicted RBP12.89□□□□□ -0.35
SCFD1-203ENST00000458591 ZNF69Q9UC07 566 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 RABL2BQ9UNT1 228 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 OR10H1Q9Y4A9 318 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 V9GY05 133 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 NPIPB9F8W1W9 429 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 M0R233 179 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 ITGA10O75578 1167 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 KRT33AO76009 404 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 FBXO45P0C2W1 286 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 CXCL2P19875 107 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 ZNHIT3Q15649 155 aaPredicted RBP12.89□□□□□ -0.35
SCFD1-203ENST00000458591 TMEM69Q5SWH9 247 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 SFRP5Q5T4F7 317 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 YOD1Q5VVQ6 348 aaPredicted RBP12.89□□□□□ -0.35
SCFD1-203ENST00000458591 LIPNQ5VXI9 398 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 POMZP3Q6PJE2 187 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 SEZ6L2Q6UXD5 910 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 STAC2Q6ZMT1 411 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 LRRC69Q6ZNQ3 347 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.89□□□□□ -0.35
SCFD1-203ENST00000458591 PPP1R14AQ96A00 147 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 OR1F2PQ96R84 312 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms