RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ANGPT4Q9Y264 503 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 FKBP7Q9Y680 259 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 TRAV36DV7A0A075B6V5 113 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 PRORSD1PA6NEY8 169 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 SERPINB7O75635 380 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 CSF3P09919 207 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 SLC25A16P16260 332 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 PAX7P23759 505 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 EFNA4P52798 201 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 CARTPTQ16568 116 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 TMEM249Q2WGJ8 235 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 ULK3Q6PHR2 472 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 C6orf89Q6UWU4 347 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 LINGO2Q7L985 606 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 SLC46A3Q7Z3Q1 461 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 RANBP3LQ86VV4 465 aaPredicted RBP13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 ARMC8Q8IUR7 673 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 UEVLDQ8IX04 471 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 C10orf111Q8N326 155 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 C10orf53Q8N6V4 93 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 LSMEM1Q8N8F7 131 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 CKAP2Q8WWK9 683 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 BCL2L2Q92843 193 aaPredicted RBP13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 SLC47A1Q96FL8 570 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 EPYCQ99645 322 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 KATNB1Q9BVA0 655 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 PRR14Q9BWN1 585 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 LINC00470Q9BZP3 86 aa13.72□□□□□ -0.21
CHCHD3-204ENST00000457942 ARFGEF3Q5TH69 2177 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 ARPC4-TTLL3A0A0A6YYG9 625 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 ANGPT2O15123 496 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 TPST1O60507 370 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 LY6HO94772 140 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 ATP4BP51164 291 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 ARF1P84077 181 aaKnown RBP13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 SF3A3Q12874 501 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 NPRL3Q12980 569 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 CYP51A1Q16850 503 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 CARD17Q5XLA6 110 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 FAM91A1Q658Y4 838 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 H1FNTQ75WM6 255 aaPredicted RBP13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 COMTD1Q86VU5 262 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 HIPK4Q8NE63 616 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 PIK3C3Q8NEB9 887 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 BHLHE22Q8NFJ8 381 aaPredicted RBP13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 OR10H5Q8NGA6 315 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 ZNF317Q96PQ6 595 aaPredicted RBP13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 VRK1Q99986 396 aaPredicted RBP13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 ASPNQ9BXN1 380 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 RABEP2Q9H5N1 569 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 IKZF5Q9H5V7 419 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 TMEM38AQ9H6F2 299 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 CRLF2Q9HC73 371 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 MOV10Q9HCE1 1003 aaKnown RBP13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 CA10Q9NS85 328 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 KLHL14Q9P2G3 628 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 B3GAT1Q9P2W7 334 aa13.71□□□□□ -0.21
CHCHD3-204ENST00000457942 SVEP1Q4LDE5 3571 aa13.71□□□□□ -0.22
CHCHD3-204ENST00000457942 IGKV1D-42A0A075B6H8 117 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 M0R3G1 203 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 SERPINI2O75830 405 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 SEC14L2O76054 403 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 CECR9P0C854 216 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 SERPINF1P36955 418 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 IDH3GP51553 393 aaPredicted RBP13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 NAAAQ02083 359 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 MFSD13AQ14CX5 517 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 OR1Q1Q15612 314 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 CEACAM16Q2WEN9 425 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 NET1Q7Z628 596 aaPredicted RBP13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 DHDDSQ86SQ9 333 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 SMYD1Q8NB12 490 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 MAGEE2Q8TD90 523 aaPredicted RBP13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 MAGEB18Q96M61 343 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 TNFRSF13CQ96RJ3 184 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 SHARPINQ9H0F6 387 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 CHODLQ9H9P2 273 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 GPR35Q9HC97 309 aa13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 LEF1Q9UJU2 399 aaPredicted RBP13.7□□□□□ -0.22
CHCHD3-204ENST00000457942 A0A096LNT2 108 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 TRBV5-3A0A0A0MS03 114 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 ZNF432O94892 652 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 OR4A8P0C604 315 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 GPX2P18283 190 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 PDLIM4P50479 330 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 POU3F1Q03052 451 aaPredicted RBP13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 LOXL1Q08397 574 aaPredicted RBP13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 PMS2P3Q13401 168 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 GGTLC2Q14390 218 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 C11orf65Q8NCR3 313 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 ADPRHL1Q8NDY3 354 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 C10orf105Q8TEF2 133 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 BOD1Q96IK1 185 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 SORCS2Q96PQ0 1159 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 OR2M2Q96R28 347 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 CPPED1Q9BRF8 314 aaPredicted RBP13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 PIMREGQ9BSJ6 248 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 NELFAQ9H3P2 528 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 SEC61A2Q9H9S3 476 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms