RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 PHYKPLQ8IUZ5 450 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 FAM89BQ8N5H3 189 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 PTGR2Q8N8N7 351 aaPredicted RBP6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 RNASE8Q8TDE3 154 aaKnown RBP6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 UBTD2Q8WUN7 234 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 ORAOV1Q8WV07 137 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 TMEM19Q96HH6 336 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 MRGPRX1Q96LB2 322 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 LINC00615Q96LM1 132 aaPredicted RBP6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 OR2A7Q96R45 310 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 GFM1Q96RP9 751 aaKnown RBP6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 STACQ99469 402 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 PHB2Q99623 299 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 PITX2Q99697 317 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 SNHG12Q9BXW3 62 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 OR10A4Q9H209 315 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 ANKRA2Q9H9E1 313 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 SLC25A19Q9HC21 320 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 MSL2Q9HCI7 577 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 ISYNA1Q9NPH2 558 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 SNTG1Q9NSN8 517 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 NLKQ9UBE8 527 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 GNG8Q9UK08 70 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 ZNF222Q9UK12 451 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 FZD4Q9ULV1 537 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 MMP17Q9ULZ9 603 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 OARD1Q9Y530 152 aa6.29□□□□□ -1.4
CUBNP3-201ENST00000457461 A0A1W2PP55 124 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 ZNF670-ZNF695F2Z2N8 137 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 J3QW42 95 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 K7ESM1 405 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 CDIPTO14735 213 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 ATP6AP2O75787 350 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 AKR7A3O95154 331 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 NR2F6P10588 404 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 SDC1P18827 310 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 TBPP20226 339 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 MPSTP25325 297 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 CD82P27701 267 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 AKT1P31749 480 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 SDC2P34741 201 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 TMEM33P57088 247 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 SPOCK1Q08629 439 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 TMEM115Q12893 351 aaPredicted RBP6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 GAMTQ14353 236 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 PCBP2Q15366 365 aaKnown RBP eCLIP6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 SURF2Q15527 256 aaPredicted RBP6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 RAB11BQ15907 218 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 TMEM241Q24JQ0 296 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 ARSJQ5FYB0 599 aaPredicted RBP6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 C9orf135Q5VTT2 229 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 NKAIN2Q5VXU1 208 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 H3F3CQ6NXT2 135 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 TMEM88Q6PEY1 159 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 TBPL2Q6SJ96 375 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 LINGO2Q7L985 606 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 ABHD12BQ7Z5M8 362 aaPredicted RBP6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 PTOV1Q86YD1 416 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 GPSM1Q86YR5 675 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 WDFY1Q8IWB7 410 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 ZFP82Q8N141 532 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 FBXO39Q8N4B4 442 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 C19orf47Q8N9M1 422 aaKnown RBP6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 FAM71CQ8NEG0 241 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 OR2L2Q8NH16 312 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 COQ8AQ8NI60 647 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 DNAJB14Q8TBM8 379 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 WFDC12Q8WWY7 111 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 SLC25A46Q96AG3 418 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 MOCOSQ96EN8 888 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 ADGRG7Q96K78 797 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 SAMD8Q96LT4 415 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 UBL7Q96S82 380 aaPredicted RBP6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 RNF2Q99496 336 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 CNPPD1Q9BV87 410 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 C1QTNF2Q9BXJ5 285 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 CDCA4Q9BXL8 241 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 SLITRK2Q9H156 845 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 ZNF430Q9H8G1 570 aaPredicted RBP6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 NOX3Q9HBY0 568 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 SLC6A20Q9NP91 592 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 MID1IP1Q9NPA3 183 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 SLC2A9Q9NRM0 540 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 RCC2Q9P258 522 aaKnown RBP6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 GULP1Q9UBP9 304 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 ZDHHC2Q9UIJ5 367 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 MMP24Q9Y5R2 645 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 SPACA6W5XKT8 324 aa6.28□□□□□ -1.4
CUBNP3-201ENST00000457461 TRBV11-1A0A0K0K1C0 115 aa6.27□□□□□ -1.41
CUBNP3-201ENST00000457461 IGLON5A6NGN9 336 aa6.27□□□□□ -1.41
CUBNP3-201ENST00000457461 SUPT3HB4E1H0 165 aa6.27□□□□□ -1.41
CUBNP3-201ENST00000457461 ZNF587BE7ETH6 402 aa6.27□□□□□ -1.41
CUBNP3-201ENST00000457461 GPR31O00270 319 aa6.27□□□□□ -1.41
CUBNP3-201ENST00000457461 NEMP1O14524 444 aa6.27□□□□□ -1.41
CUBNP3-201ENST00000457461 UBFD1O14562 309 aaKnown RBP6.27□□□□□ -1.41
CUBNP3-201ENST00000457461 CASKO14936 926 aa6.27□□□□□ -1.41
CUBNP3-201ENST00000457461 SMAD9O15198 467 aaKnown RBP6.27□□□□□ -1.41
CUBNP3-201ENST00000457461 SLC16A5O15375 505 aa6.27□□□□□ -1.41
CUBNP3-201ENST00000457461 TGOLN2O43493 480 aa6.27□□□□□ -1.41
CUBNP3-201ENST00000457461 SRPX2O60687 465 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms