RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 TP63Q9H3D4 680 aaPredicted RBP9.57□□□□□ -0.88
SYPL1-202ENST00000455385 RNF122Q9H9V4 155 aa9.57□□□□□ -0.88
SYPL1-202ENST00000455385 FANCFQ9NPI8 374 aa9.57□□□□□ -0.88
SYPL1-202ENST00000455385 PAPOLBQ9NRJ5 636 aaKnown RBP9.57□□□□□ -0.88
SYPL1-202ENST00000455385 KIF17Q9P2E2 1029 aa9.57□□□□□ -0.88
SYPL1-202ENST00000455385 CLEC4AQ9UMR7 237 aa9.57□□□□□ -0.88
SYPL1-202ENST00000455385 LOC102725191A0A1B0GVB3 256 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 MBD3L4A6NDZ8 208 aaPredicted RBP9.56□□□□□ -0.88
SYPL1-202ENST00000455385 MBD3L3A6NE82 208 aaPredicted RBP9.56□□□□□ -0.88
SYPL1-202ENST00000455385 MBD3L5A6NJ08 208 aaPredicted RBP9.56□□□□□ -0.88
SYPL1-202ENST00000455385 SERPINI2O75830 405 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 OR6A2O95222 327 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 STSP08842 583 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 GLI4P10075 376 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 OSMP13725 252 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 GNLYP22749 145 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 PTGER4P35408 488 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 ALG10Q5BKT4 473 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 SMARCD3Q6STE5 483 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 GALNT11Q8NCW6 608 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 MBD3L2Q8NHZ7 208 aaPredicted RBP9.56□□□□□ -0.88
SYPL1-202ENST00000455385 ZNF385AQ96PM9 386 aaKnown RBP9.56□□□□□ -0.88
SYPL1-202ENST00000455385 KRT84Q9NSB2 600 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 RASD1Q9Y272 281 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 POFUT2Q9Y2G5 429 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 PHF3Q92576 2039 aaKnown RBP9.56□□□□□ -0.88
SYPL1-202ENST00000455385 TRGV8A0A0C4DH27 118 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 A0A1W2PNV4 684 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 RNF13O43567 381 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 NDUFB2O95178 105 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 PLGP00747 810 aaPredicted RBP9.56□□□□□ -0.88
SYPL1-202ENST00000455385 HOXD4P09016 255 aaPredicted RBP9.56□□□□□ -0.88
SYPL1-202ENST00000455385 IGFBP5P24593 272 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 CA7P43166 264 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 PTDSS1P48651 473 aaKnown RBP9.56□□□□□ -0.88
SYPL1-202ENST00000455385 SLC16A1P53985 500 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 PRPS1P60891 318 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 PMPCAQ10713 525 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 FOXF2Q12947 444 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 ZIK1Q3SY52 487 aaPredicted RBP9.56□□□□□ -0.88
SYPL1-202ENST00000455385 ANKDD1AQ495B1 522 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 CLEC12AQ5QGZ9 265 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 B3GNT6Q6ZMB0 384 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 CREB3L2Q70SY1 520 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 PXKQ7Z7A4 578 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 TUSC5Q8IXB3 177 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 SLC43A2Q8N370 569 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 PARP8Q8N3A8 854 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 NAXEQ8NCW5 288 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 OR9K2Q8NGE7 335 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 FANK1Q8TC84 345 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 ADAM18Q9Y3Q7 739 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 CDH10Q9Y6N8 788 aa9.56□□□□□ -0.88
SYPL1-202ENST00000455385 FREM1Q5H8C1 2179 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 IGKV3D-15A0A087WSY6 115 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 TRAF3IP2O43734 574 aaPredicted RBP9.55□□□□□ -0.88
SYPL1-202ENST00000455385 VAMP5O95183 116 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 RCBTB2O95199 551 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 SNAP29O95721 258 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 POU1F1P28069 291 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 CRISP1P54107 249 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 CTXN1P60606 82 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 ERVK-25P63136 954 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 POU3F1Q03052 451 aaPredicted RBP9.55□□□□□ -0.88
SYPL1-202ENST00000455385 PDK3Q15120 406 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 POU4F3Q15319 338 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 SF3B4Q15427 424 aaKnown RBP eCLIP9.55□□□□□ -0.88
SYPL1-202ENST00000455385 GUSBP1Q15486 140 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 TMEM236Q5W0B7 351 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 P4HA3Q7Z4N8 544 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 GCNT2Q8N0V5 402 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 CLDN22Q8N7P3 220 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 OR4Q3Q8NH05 313 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 INTS12Q96CB8 462 aaKnown RBP9.55□□□□□ -0.88
SYPL1-202ENST00000455385 DMRTA2Q96SC8 542 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 KATNB1Q9BVA0 655 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 SF3B5Q9BWJ5 86 aaKnown RBP9.55□□□□□ -0.88
SYPL1-202ENST00000455385 INIPQ9NRY2 104 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 MED29Q9NX70 200 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 ZNF346Q9UL40 294 aaKnown RBP9.55□□□□□ -0.88
SYPL1-202ENST00000455385 FLVCR1Q9Y5Y0 555 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 INTS1Q8N201 2190 aaKnown RBP9.55□□□□□ -0.88
SYPL1-202ENST00000455385 HIVEP3Q5T1R4 2406 aa9.55□□□□□ -0.88
SYPL1-202ENST00000455385 EIF4E1BA6NMX2 242 aaKnown RBP9.54□□□□□ -0.88
SYPL1-202ENST00000455385 H3BN98 237 aa9.54□□□□□ -0.88
SYPL1-202ENST00000455385 BHLHE40O14503 412 aa9.54□□□□□ -0.88
SYPL1-202ENST00000455385 YES1P07947 543 aa9.54□□□□□ -0.88
SYPL1-202ENST00000455385 CD14P08571 375 aa9.54□□□□□ -0.88
SYPL1-202ENST00000455385 IFNGR1P15260 489 aa9.54□□□□□ -0.88
SYPL1-202ENST00000455385 ZNF43P17038 809 aa9.54□□□□□ -0.88
SYPL1-202ENST00000455385 EDNRAP25101 427 aa9.54□□□□□ -0.88
SYPL1-202ENST00000455385 CEACAM8P31997 349 aaPredicted RBP9.54□□□□□ -0.88
SYPL1-202ENST00000455385 TIMP3P35625 211 aa9.54□□□□□ -0.88
SYPL1-202ENST00000455385 RPL4P36578 427 aaKnown RBP9.54□□□□□ -0.88
SYPL1-202ENST00000455385 RNPS1Q15287 305 aaKnown RBP9.54□□□□□ -0.88
SYPL1-202ENST00000455385 ACKR1Q16570 336 aa9.54□□□□□ -0.88
SYPL1-202ENST00000455385 ACSM5Q6NUN0 579 aa9.54□□□□□ -0.88
SYPL1-202ENST00000455385 FAM122BQ7Z309 247 aa9.54□□□□□ -0.88
SYPL1-202ENST00000455385 IQCF1Q8N6M8 205 aa9.54□□□□□ -0.88
SYPL1-202ENST00000455385 ANKK1Q8NFD2 765 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms