RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 TSPAN31Q12999 210 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 FBXL19-AS1Q494R0 122 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 ZBED5Q49AG3 693 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 CD300LDQ6UXZ3 194 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 NCCRP1Q6ZVX7 275 aaPredicted RBP12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 HDDC2Q7Z4H3 204 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 STK32CQ86UX6 486 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 HIPK1Q86Z02 1210 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 EPHX4Q8IUS5 362 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 OR10G2Q8NGC3 310 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 GIPC3Q8TF64 312 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 PYDC1Q8WXC3 89 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 DNAJC9Q8WXX5 260 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 LRRC46Q96FV0 321 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 FAM46AQ96IP4 442 aaKnown RBP12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 NTN4Q9HB63 628 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 S100A14Q9HCY8 104 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 VNN3Q9NY84 501 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 JKAMPQ9P055 326 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 STX18Q9P2W9 335 aaKnown RBP12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 FOXD3Q9UJU5 478 aaPredicted RBP12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 CLEC4AQ9UMR7 237 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 PROCRQ9UNN8 238 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 NOSIPQ9Y314 301 aaKnown RBP12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 U3KQV3 271 aa12.71□□□□□ -0.37
HMGXB4-204ENST00000455359 UNC119BA6NIH7 251 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 BLOC1S5-TXNDC5H3BN57 136 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 H3BNX3 289 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 CDC42EP2O14613 210 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 RNF13O43567 381 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 PTP4A3O75365 173 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 MRPL33O75394 65 aaKnown RBP12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 CLDN14O95500 239 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 ADAP00813 363 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 ANXA8P13928 327 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 BMP5P22003 454 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 AHCYP23526 432 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 GPR4P46093 362 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 OR3A2P47893 321 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 RPL18Q07020 188 aaKnown RBP12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 SRSF1Q07955 248 aaKnown RBP eCLIP12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 RPL13AP3Q6NVV1 102 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 MYO7BQ6PIF6 2116 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 NHLRC1Q6VVB1 395 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 LIX1LQ8IVB5 337 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 SVOPLQ8N434 492 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 ZIC4Q8N9L1 334 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 AQP11Q8NBQ7 271 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 OR5K1Q8NHB7 308 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 ADAD1Q96M93 576 aaKnown RBP12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 KCNJ16Q9NPI9 418 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 INIPQ9NRY2 104 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 SEC14L4Q9UDX3 406 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 SIGLEC7Q9Y286 467 aa12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 DIDO1Q9BTC0 2240 aaKnown RBP12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 GCN1Q92616 2671 aaKnown RBP12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
HMGXB4-204ENST00000455359 A0A1W2PRG6 482 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 TRAF3IP2O43734 574 aaPredicted RBP12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 NDUFB2O95178 105 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 HPRP00739 348 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 AQP2P41181 271 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 ASCL1P50553 236 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 DAP3P51398 398 aaKnown RBP12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 SIRPAP78324 504 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 IL1RL1Q01638 556 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 ALG10Q5BKT4 473 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 FAM205BPQ63HN1 556 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 TFAP2EQ6VUC0 442 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 AAED1Q7RTV5 226 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 BTLAQ7Z6A9 289 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 ZDHHC13Q8IUH4 622 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 ZNF100Q8IYN0 542 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 KDM8Q8N371 416 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 CLDN22Q8N7P3 220 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 OR13C2Q8NGS9 318 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 OR51A7Q8NH64 312 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 LRTOMTQ8WZ04 291 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 APH1AQ96BI3 265 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 TNFRSF13CQ96RJ3 184 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 GPX7Q96SL4 187 aaPredicted RBP12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 ELOVL5Q9NYP7 299 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 PDP1Q9P0J1 537 aaPredicted RBP12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 KLF2Q9Y5W3 355 aaPredicted RBP12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 PCNX1Q96RV3 2341 aa12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 SPTBN1Q01082 2364 aaKnown RBP12.69□□□□□ -0.38
HMGXB4-204ENST00000455359 A8MXE2 369 aa12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 CENPBD1B2RD01 187 aa12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 G3V2T6 193 aa12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 ZNF432O94892 652 aa12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 GASTP01350 101 aa12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 APEHP13798 732 aaKnown RBP12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 PEX19P40855 299 aa12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 IST1P53990 364 aa12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 POU3F1Q03052 451 aaPredicted RBP12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 FHL1Q13642 323 aa12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 P2RY6Q15077 328 aa12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 VWA1Q6PCB0 445 aa12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 DPY19L2P2Q6ZN68 376 aa12.68□□□□□ -0.38
HMGXB4-204ENST00000455359 RASSF6Q6ZTQ3 369 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms