RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 ARHGEF17Q96PE2 2063 aaPredicted RBP9.67□□□□□ -0.86
GTF3C2-206ENST00000454704 ASXL3Q9C0F0 2248 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 A0A0A6YYJ9 748 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 TRBV2A0A0J9YWF9 115 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 TEX13CA0A0J9YWL9 993 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 A0A1B0GVT2 93 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 ZNF860A6NHJ4 632 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 TUBAL3A6NHL2 446 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 E9PI62 339 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 GABARAPH6UMI1 98 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 AIPO00170 330 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 CPNE3O75131 537 aaKnown RBP9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 TXNDC12O95881 172 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 PAHP00439 452 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 IGLV3-19P01714 112 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 RAF1P04049 648 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 MRPL3P09001 348 aaKnown RBP9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 H2AFB2P0C5Z0 115 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 ZNF883P0CG24 379 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 EDNRAP25101 427 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 ACVR1BP36896 505 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 GRK6P43250 576 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 CSNK1EP49674 416 aaKnown RBP9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 HSD17B7P56937 341 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 RACK1P63244 317 aaKnown RBP9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 ID2Q02363 134 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 FUT7Q11130 342 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 STX4Q12846 297 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 INSL4Q14641 139 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 SNAP47Q5SQN1 464 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 WBP2NLQ6ICG8 309 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 LRRN1Q6UXK5 716 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 UBE2J2Q8N2K1 259 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 C19orf47Q8N9M1 422 aaKnown RBP9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 TMEM52Q8NDY8 209 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 FAM71CQ8NEG0 241 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 C17orf47Q8NEP4 570 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 OR5J2Q8NH18 312 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 C1orf216Q8TAB5 229 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 MED30Q96HR3 178 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 ABHD1Q96SE0 405 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 DDOQ99489 341 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 CACNG6Q9BXT2 260 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 GALNT9Q9HCQ5 603 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 PRTFDC1Q9NRG1 225 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 PLSCR3Q9NRY6 295 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 GPR27Q9NS67 375 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 EVA1BQ9NVM1 165 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 FBXO34Q9NWN3 711 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 HIF3AQ9Y2N7 669 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 ZNF281Q9Y2X9 895 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 MRPS2Q9Y399 296 aaKnown RBP9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 PCDHGA9Q9Y5G4 932 aaKnown RBP9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 NPTNQ9Y639 398 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 SCN2AQ99250 2005 aa9.66□□□□□ -0.86
GTF3C2-206ENST00000454704 NPIPA5A0A0B4J1W7 369 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 A0A1W2PRG6 482 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 ZC3H12DA2A288 527 aaKnown RBP9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 NPIPA7E9PJI5 369 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 TGM6O95932 706 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 CSTAP01040 98 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 TFP02787 698 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 NPIPA8P0DM63 369 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 SULT1A3P0DMM9 295 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 SULT1A4P0DMN0 295 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 HIST1H1CP16403 213 aaKnown RBP9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 SPI1P17947 270 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 ATF1P18846 271 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 FUT1P19526 365 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 CFPP27918 469 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 RPL4P36578 427 aaKnown RBP9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 SLC6A8P48029 635 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 CCR9P51686 369 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 AFF3P51826 1226 aaKnown RBP9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 AGFG1P52594 562 aaKnown RBP9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 VSX2P58304 361 aaPredicted RBP9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 KLF9Q13886 244 aaPredicted RBP9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 CEP78Q5JTW2 689 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 GPR139Q6DWJ6 353 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 KIRREL2Q6UWL6 708 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 LYPD4Q6UWN0 246 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 Q6ZSR6 202 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 ASB18Q6ZVZ8 466 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 KRT74Q7RTS7 529 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 SLC16A9Q7RTY1 509 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 TMPRSS7Q7RTY8 843 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 OR6V1Q8N148 313 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 C9orf62Q8N4C0 152 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 ZNF614Q8N883 585 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 NPEPL1Q8NDH3 523 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 SDR9C7Q8NEX9 313 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 CCL4L1Q8NHW4 92 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 ZNF671Q8TAW3 534 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 RHBDD1Q8TEB9 315 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 TCTN2Q96GX1 697 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 PEX11GQ96HA9 241 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 LCORQ96JN0 433 aaPredicted RBP9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 ZNF285Q96NJ3 590 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 BEX2Q9BXY8 128 aa9.65□□□□□ -0.86
GTF3C2-206ENST00000454704 PPIL3Q9H2H8 161 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms