RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 HOXC4P09017 264 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 IL9P15248 144 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 GNALP38405 381 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 CAPZA2P47755 286 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 CCR5P51681 352 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 SNTB2Q13425 540 aaKnown RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 HBMQ6B0K9 141 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 PTCRAQ6ISU1 281 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 SYT13Q7L8C5 426 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 KRT77Q7Z794 578 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 MS4A15Q8N5U1 240 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 LCORQ96JN0 433 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 PHF7Q9BWX1 381 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 MRPL39Q9NYK5 338 aaKnown RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 METTL12A8MUP2 240 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 ZNF879B4DU55 563 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 SLC19A2O60779 497 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 SRFP11831 508 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 HSD17B7P56937 341 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 HSD11B2P80365 405 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 RPL18Q07020 188 aaKnown RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 BTBD16Q32M84 506 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 GLYR1Q49A26 553 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 LIPNQ5VXI9 398 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 VASNQ6EMK4 673 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 OR1L3Q8NH93 324 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 OR10A4Q9H209 315 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 WDR76Q9H967 626 aa10.93□□□□□ -0.66
SMPD4-213ENST00000454468 RPH3AQ9Y2J0 694 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-213ENST00000454468 CACNA1GO43497 2377 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 FAM221BA6H8Z2 402 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 ARFIP1P53367 373 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 CEBPEQ15744 281 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 MANEAQ5SRI9 462 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 FAM205BPQ63HN1 556 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 OR8H1Q8NGG4 311 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 EMC6Q9BV81 110 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 FKRPQ9H9S5 495 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 OR7A10O76100 309 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 AHSA1O95433 338 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 NME1P15531 152 aaKnown RBP10.92□□□□□ -0.66
SMPD4-213ENST00000454468 SFTPDP35247 375 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 GAS1P54826 345 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 FGFBP1Q14512 234 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 BICRALQ6AI39 1079 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 C11orf88Q6PI97 169 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 NR2C2APQ86WQ0 139 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 LINC00346Q8IVM7 164 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 JAGN1Q8N5M9 183 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 OR5AK2Q8NH90 309 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 OR6C1Q96RD1 312 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 ABHD1Q96SE0 405 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 COMMD4Q9H0A8 199 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 ZMAT3Q9HA38 289 aaKnown RBP10.92□□□□□ -0.66
SMPD4-213ENST00000454468 TMEM138Q9NPI0 162 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 RBFOX1Q9NWB1 397 aaKnown RBP10.92□□□□□ -0.66
SMPD4-213ENST00000454468 DCDC2BA2VCK2 349 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 TACSTD2P09758 323 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 ATF1P18846 271 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 GPR3P46089 330 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 NRG3P56975 720 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 ACTA2P62736 377 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 ACTG2P63267 376 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 ADAM8P78325 824 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 GPR176Q14439 515 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 OR7A5Q15622 319 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 SLC25A25Q6KCM7 469 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 Q7L0L9 218 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 SLC35F3Q8IY50 421 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 PPP1R14AQ96A00 147 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 ZNF775Q96BV0 537 aaPredicted RBP10.92□□□□□ -0.66
SMPD4-213ENST00000454468 LPAR4Q99677 370 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 AUNIPQ9H7T9 357 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 MED11Q9P086 117 aa10.92□□□□□ -0.66
SMPD4-213ENST00000454468 A0A087WUJ7 227 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 PRR19A6NJB7 356 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 H3BUI4 141 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 DCTN6O00399 190 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 MBTPS2O43462 519 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 ITGA10O75578 1167 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 SVILO95425 2214 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 OR2T7P0C7T2 308 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 POU3F3P20264 500 aaPredicted RBP10.91□□□□□ -0.66
SMPD4-213ENST00000454468 FGF9P31371 208 aaPredicted RBP10.91□□□□□ -0.66
SMPD4-213ENST00000454468 PRPS1P60891 318 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 C19orf48Q6RUI8 117 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 ZNF627Q7L945 461 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 CHMP1BQ7LBR1 199 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 OR2T27Q8NH04 317 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 SETD6Q8TBK2 473 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 HOXD1Q9GZZ0 328 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 POLHQ9Y253 713 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 RCE1Q9Y256 329 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 EXOGQ9Y2C4 368 aaKnown RBP10.91□□□□□ -0.66
SMPD4-213ENST00000454468 YES1P07947 543 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 CD14P08571 375 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 ZNF823P16415 610 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 S1PR1P21453 382 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 MAP3K8P41279 467 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 GNG2P59768 71 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms