RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 MAELQ96JY0 434 aaKnown RBP9.43□□□□□ -0.9
USP1-204ENST00000452143 OXGR1Q96P68 337 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 SEC61A2Q9H9S3 476 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 DYNLRB1Q9NP97 96 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 SDR39U1Q9NRG7 319 aaPredicted RBP9.43□□□□□ -0.9
USP1-204ENST00000452143 THAP1Q9NVV9 213 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 ZIM2Q9NZV7 527 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 B3GAT1Q9P2W7 334 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 USP22Q9UPT9 525 aa9.43□□□□□ -0.9
USP1-204ENST00000452143 IGHV2OR16-5A0A0B4J2B6 119 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 LOC102725191A0A1B0GVB3 256 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 LRP5LA4QPB2 252 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 ZNF99A8MXY4 864 aaPredicted RBP9.42□□□□□ -0.9
USP1-204ENST00000452143 TCF21O43680 179 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 SNNO75324 88 aaPredicted RBP9.42□□□□□ -0.9
USP1-204ENST00000452143 CELA3BP08861 270 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 BMP2P12643 396 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 PCMT1P22061 227 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 APEX1P27695 318 aaKnown RBP9.42□□□□□ -0.9
USP1-204ENST00000452143 THBS4P35443 961 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 PRSS12P56730 875 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 ARF1P84077 181 aaKnown RBP9.42□□□□□ -0.9
USP1-204ENST00000452143 HGFACQ04756 655 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 MPP2Q14168 576 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 MFSD13AQ14CX5 517 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 CEACAM16Q2WEN9 425 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 ZNF311Q5JNZ3 666 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 ATG16L1Q676U5 607 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 SPATA21Q7Z572 469 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 NET1Q7Z628 596 aaPredicted RBP9.42□□□□□ -0.9
USP1-204ENST00000452143 CROCCP2Q86T23 111 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 MYPOPQ86VE0 399 aaPredicted RBP9.42□□□□□ -0.9
USP1-204ENST00000452143 SVOPLQ8N434 492 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 LSMEM1Q8N8F7 131 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 LINC01356Q8N9X3 169 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 BBS10Q8TAM1 723 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 SLC38A4Q969I6 547 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 VPS33AQ96AX1 596 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 SLC25A36Q96CQ1 311 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 KTI12Q96EK9 354 aaPredicted RBP9.42□□□□□ -0.9
USP1-204ENST00000452143 DOK1Q99704 481 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 SOX7Q9BT81 388 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 RAD21L1Q9H4I0 556 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 WDR55Q9H6Y2 383 aaPredicted RBP9.42□□□□□ -0.9
USP1-204ENST00000452143 NOX3Q9HBY0 568 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 CRLF2Q9HC73 371 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 GPR35Q9HC97 309 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 BCL2L10Q9HD36 194 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 KCNK9Q9NPC2 374 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 A4GALTQ9NPC4 353 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 RPS6KB2Q9UBS0 482 aa9.42□□□□□ -0.9
USP1-204ENST00000452143 M0R082 166 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 TRAF3IP2O43734 574 aaPredicted RBP9.41□□□□□ -0.9
USP1-204ENST00000452143 LILRA1O75019 489 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 ETS2P15036 469 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 PRKAR1BP31321 381 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 EVX1P49640 407 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 CDH15P55291 814 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 NPRL3Q12980 569 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 SNTB2Q13425 540 aaKnown RBP9.41□□□□□ -0.9
USP1-204ENST00000452143 RIN1Q13671 783 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 C1DQ13901 141 aaKnown RBP9.41□□□□□ -0.9
USP1-204ENST00000452143 DAG1Q14118 895 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 C6orf10Q5SRN2 563 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 LCE2AQ5TA79 106 aaPredicted RBP9.41□□□□□ -0.9
USP1-204ENST00000452143 HHATQ5VTY9 493 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 NXNQ6DKJ4 435 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 H1FNTQ75WM6 255 aaPredicted RBP9.41□□□□□ -0.9
USP1-204ENST00000452143 TMEM123Q8N131 208 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 KDM8Q8N371 416 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 ZNF417Q8TAU3 575 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 UBASH3BQ8TF42 649 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 DNAJA4Q8WW22 397 aaPredicted RBP9.41□□□□□ -0.9
USP1-204ENST00000452143 CKAP2Q8WWK9 683 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 C1orf159Q96HA4 380 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 OR2M2Q96R28 347 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 ZNF587Q96SQ5 575 aaPredicted RBP9.41□□□□□ -0.9
USP1-204ENST00000452143 PAIP2Q9BPZ3 127 aaKnown RBP9.41□□□□□ -0.9
USP1-204ENST00000452143 CENPHQ9H3R5 247 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 SEC14L4Q9UDX3 406 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 TMEFF2Q9UIK5 374 aaPredicted RBP9.41□□□□□ -0.9
USP1-204ENST00000452143 CORINQ9Y5Q5 1042 aa9.41□□□□□ -0.9
USP1-204ENST00000452143 TRAV36DV7A0A075B6V5 113 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 TMEM129A0AVI4 362 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 ZNF503-AS2A6NEH8 195 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 C5orf58C9J3I9 102 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 IFNGR1P15260 489 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 NR4A1P22736 598 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 GRPRP30550 384 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 IL2RGP31785 369 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 CAPZA2P47755 286 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 POLR2JP52435 117 aaKnown RBP9.4□□□□□ -0.9
USP1-204ENST00000452143 DVL1P1P54792 670 aaPredicted RBP9.4□□□□□ -0.9
USP1-204ENST00000452143 SRSF2Q01130 221 aaKnown RBP9.4□□□□□ -0.9
USP1-204ENST00000452143 RGNQ15493 299 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 ADRM1Q16186 407 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 GSG1Q2KHT4 349 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 GTDC1Q4AE62 458 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 ALG10BQ5I7T1 473 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 CEP85LQ5SZL2 805 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms