RNA–Protein interactions for RNA: ENST00000452029.1

TMEM87B-202, Transcript of transmembrane protein 87B, humanhuman

TSL 1 (best)

Gene TMEM87B, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87B-202ENST00000452029 CWH43Q9H720 699 aa3.95□□□□□ -1.78
TMEM87B-202ENST00000452029 ZNF556Q9HAH1 456 aa3.95□□□□□ -1.78
TMEM87B-202ENST00000452029 NTN4Q9HB63 628 aa3.95□□□□□ -1.78
TMEM87B-202ENST00000452029 PARVGQ9HBI0 331 aa3.95□□□□□ -1.78
TMEM87B-202ENST00000452029 MRPL47Q9HD33 250 aaKnown RBP3.95□□□□□ -1.78
TMEM87B-202ENST00000452029 FLVCR2Q9UPI3 526 aa3.95□□□□□ -1.78
TMEM87B-202ENST00000452029 AUP1Q9Y679 476 aa3.95□□□□□ -1.78
TMEM87B-202ENST00000452029 AKNAQ7Z591 1439 aa3.95□□□□□ -1.78
TMEM87B-202ENST00000452029 IGLV3-22A0A075B6J6 115 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 TRAV6A0A075B6T7 132 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 PDHXO00330 501 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 CCL21O00585 134 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 UGT1A9O60656 530 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 CBR3O75828 277 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 FGFR1OPO95684 399 aaKnown RBP3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 IGHV2-5P01817 119 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 PRPS2P11908 318 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 HTR1FP30939 366 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 FOXN2P32314 431 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 KCNJ3P48549 501 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 THBS3P49746 956 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 DLX5P56178 289 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 UBE2MP61081 183 aaKnown RBP3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 PSMC5P62195 406 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 RPS15AP62244 130 aaKnown RBP3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 IRX3P78415 501 aaPredicted RBP3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 CALCOCO2Q13137 446 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 NCF4Q15080 339 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 USF2Q15853 346 aaPredicted RBP3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 REG3GQ6UW15 175 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 LRRTM1Q86UE6 522 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 C9orf40Q8IXQ3 194 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 NEIL2Q969S2 332 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 PSMG2Q969U7 264 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 CMTM7Q96FZ5 175 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 DUS3LQ96G46 650 aaKnown RBP3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 TRNT1Q96Q11 434 aaKnown RBP3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 OR8B4Q96RC9 309 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 SH3GL1Q99961 368 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 RETNQ9HD89 108 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 IFNKQ9P0W0 207 aa3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 STX18Q9P2W9 335 aaKnown RBP3.94□□□□□ -1.78
TMEM87B-202ENST00000452029 IGLV4-3A0A075B6K6 122 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 IGKV1D-8A0A087WSZ0 117 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 A0A1B0GTH9 108 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 FAM231BA6NCW3 169 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 ERVV-2B6SEH9 535 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 G3V3Y1 287 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 SOX15O60248 233 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 FARS2O95363 451 aaKnown RBP3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 SLC2A10O95528 541 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 FGGP02679 453 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 C2P06681 752 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 H2AFZP0C0S5 128 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 MGMTP16455 207 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 HOXB8P17481 243 aaPredicted RBP3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 PMCHP20382 165 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 GABRR2P28476 465 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 TNFSF9P41273 254 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 SLC26A2P50443 739 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 PAX2Q02962 417 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 SERTAD2Q14140 314 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 VAMP3Q15836 100 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 RPEL1Q2QD12 228 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 SPESP1Q6UW49 350 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 NOTCH2NLQ7Z3S9 236 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 SNX20Q7Z614 316 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 ARHGAP18Q8N392 663 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 LINC00469Q8N7U9 141 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 MRGPRFQ96AM1 343 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 PAGE5Q96GU1 130 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 ARL5BQ96KC2 179 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 LYZL4Q96KX0 146 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 KLHDC3Q9BQ90 382 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 FRMD8P1Q9BZ68 369 aaPredicted RBP3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 GBA3Q9H227 469 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 LY9Q9HBG7 655 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 UBAP1Q9NZ09 502 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 UXTQ9UBK9 157 aaPredicted RBP3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 PRODH2Q9UF12 536 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 ZNF229Q9UJW7 825 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 GGA2Q9UJY4 613 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 POFUT2Q9Y2G5 429 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 CDH10Q9Y6N8 788 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 UBN2Q6ZU65 1347 aa3.93□□□□□ -1.78
TMEM87B-202ENST00000452029 CNTNAP1P78357 1384 aa3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 IGHV3-16A0A0C4DH30 117 aa3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 GOLGA8QA0A0J9YX86 632 aa3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 RPL37AP8A6NKH3 93 aa3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 A8MUA0 341 aa3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 LOC110117498-PIK3R3F6TDL0 507 aa3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 PPP1R2P9O14990 202 aa3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 MRPS12O15235 138 aaKnown RBP3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 LMX1BO60663 402 aa3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 NOL4O94818 638 aa3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 ETHE1O95571 254 aa3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 DUS4LO95620 317 aaKnown RBP3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 LALBAP00709 142 aa3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 FASP25445 335 aa3.92□□□□□ -1.78
TMEM87B-202ENST00000452029 LMO2P25791 158 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms