RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CEP250Q9BV73 2442 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 DOCK10Q96BY6 2186 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 A0A1W2PPW3 197 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 SLC22A1O15245 554 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 ZIC3O60481 467 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 SERPINI2O75830 405 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 SBK2P0C263 348 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 SPI1P17947 270 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 NR4A1P22736 598 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 TCEA1P23193 301 aaKnown RBP12.84□□□□□ -0.35
USP39-207ENST00000450066 CASRP41180 1078 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 DBPQ10586 325 aaPredicted RBP12.84□□□□□ -0.35
USP39-207ENST00000450066 MLLT11Q13015 90 aaPredicted RBP12.84□□□□□ -0.35
USP39-207ENST00000450066 LSAMPQ13449 338 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 GGTLC2Q14390 218 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 TSTQ16762 297 aaKnown RBP12.84□□□□□ -0.35
USP39-207ENST00000450066 MESTQ5EB52 335 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 LCN1P1Q5VSP4 162 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 ARIH2OSQ8N7S6 290 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 ZNF485Q8NCK3 441 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 OR5M1Q8NGP8 315 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 ZPLD1Q8TCW7 415 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 NXPE2Q96DL1 559 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 TXNIPQ9H3M7 391 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 ISYNA1Q9NPH2 558 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 TIMMDC1Q9NPL8 285 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 ASB6Q9NWX5 421 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 ALKBH4Q9NXW9 302 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 LRFN1Q9P244 771 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 DKKL1Q9UK85 242 aa12.84□□□□□ -0.35
USP39-207ENST00000450066 ASPMQ8IZT6 3477 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 A0A0G2JMM0 328 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 A0A1W2PPB8 328 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 A0A1W2PRS3 328 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 KIR3DP1A8MWS1 328 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 IGHMP01871 453 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 ZNF17P17021 662 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 CD96P40200 585 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 DNASE1L1P49184 302 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 DIO1P49895 249 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 RPL27P61353 136 aaKnown RBP12.83□□□□□ -0.36
USP39-207ENST00000450066 PUDPQ08623 228 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 AQP6Q13520 282 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 ACKR1Q16570 336 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 GLYR1Q49A26 553 aaPredicted RBP12.83□□□□□ -0.36
USP39-207ENST00000450066 OR2G6Q5TZ20 316 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 ADCK1Q86TW2 530 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 ATCAYQ86WG3 371 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 POMGNT2Q8NAT1 580 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 ZNF248Q8NDW4 579 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 OR52N1Q8NH53 320 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 THAP4Q8WY91 577 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 RELTQ969Z4 430 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 UTP23Q9BRU9 249 aaKnown RBP12.83□□□□□ -0.36
USP39-207ENST00000450066 DCUN1D5Q9BTE7 237 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 CHST11Q9NPF2 352 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 B3GALT5Q9Y2C3 310 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 HDGFL3Q9Y3E1 203 aa12.83□□□□□ -0.36
USP39-207ENST00000450066 C12orf71A8MTZ7 269 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 MS4A18H0YCH9 400 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 CDK2AP1O14519 115 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 XKRYO14609 159 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 AIREO43918 545 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 CNR1P21554 472 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 GADD45AP24522 165 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 ACTC1P68032 377 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 ACTA1P68133 377 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 CAMK2BQ13554 666 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 RTP5Q14D33 572 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 SSX1Q16384 188 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 MS4A18Q3C1V0 323 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 TUBA3EQ6PEY2 450 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 GHDCQ8N2G8 530 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 KLHL36Q8N4N3 616 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 TMEM99Q8N816 258 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 EXD3Q8N9H8 876 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 ZNF519Q8TB69 540 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 GATAD2BQ8WXI9 593 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 ZMYND19Q96E35 227 aaPredicted RBP12.82□□□□□ -0.36
USP39-207ENST00000450066 UBL7Q96S82 380 aaPredicted RBP12.82□□□□□ -0.36
USP39-207ENST00000450066 ARHGAP9Q9BRR9 750 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 TMEM185BQ9H7F4 350 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 FANCFQ9NPI8 374 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 RPRD1BQ9NQG5 326 aaKnown RBP12.82□□□□□ -0.36
USP39-207ENST00000450066 MOKQ9UQ07 419 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 RPH3AQ9Y2J0 694 aaPredicted RBP12.82□□□□□ -0.36
USP39-207ENST00000450066 CELSR3Q9NYQ7 3312 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 A0A1W2PRG6 482 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 DAPL1A0PJW8 107 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 NPIPB13A6NJU9 1138 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 NPIPB4C9JG80 1138 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 NEURL1O76050 574 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 GLCEO94923 617 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 RENP00797 406 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 PAX7P23759 505 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 SRD5A2P31213 254 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 RRADP55042 308 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 TLE3Q04726 772 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 SPCS2Q15005 226 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 ATP1A1-AS1Q5TC04 95 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms