RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ANKRD16Q6P6B7 361 aa13.35□□□□□ -0.27
CHD3-205ENST00000449744 ADPRHL1Q8NDY3 354 aa13.35□□□□□ -0.27
CHD3-205ENST00000449744 PIK3C3Q8NEB9 887 aa13.35□□□□□ -0.27
CHD3-205ENST00000449744 BCL2L2Q92843 193 aaPredicted RBP13.35□□□□□ -0.27
CHD3-205ENST00000449744 ZNF317Q96PQ6 595 aaPredicted RBP13.35□□□□□ -0.27
CHD3-205ENST00000449744 ARHGDIGQ99819 225 aa13.35□□□□□ -0.27
CHD3-205ENST00000449744 SH3GL1Q99961 368 aa13.35□□□□□ -0.27
CHD3-205ENST00000449744 WFDC6Q9BQY6 131 aa13.35□□□□□ -0.27
CHD3-205ENST00000449744 A0A096LPE4 126 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 LOC102725191A0A1B0GVB3 256 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 A0A1W2PPZ6 126 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 ATP6V1G2-DDX39BF2Z307 99 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 SSX4O60224 188 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 TPST2O60704 377 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 FMO6PO60774 539 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 ZNF432O94892 652 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 VIMP08670 466 aaKnown RBP13.34□□□□□ -0.27
CHD3-205ENST00000449744 HOXB1P14653 301 aaPredicted RBP13.34□□□□□ -0.27
CHD3-205ENST00000449744 APOBEC3AP31941 199 aaPredicted RBP13.34□□□□□ -0.27
CHD3-205ENST00000449744 PCGF2P35227 344 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 CHRNB3Q05901 458 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 PMS2P3Q13401 168 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 RAB35Q15286 201 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 TRMT5Q32P41 509 aaKnown RBP13.34□□□□□ -0.27
CHD3-205ENST00000449744 ZNF613Q6PF04 617 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 LINGO2Q7L985 606 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 SCAIQ8N9R8 606 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 ANKK1Q8NFD2 765 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 VANGL1Q8TAA9 524 aaPredicted RBP13.34□□□□□ -0.27
CHD3-205ENST00000449744 MAGEE2Q8TD90 523 aaPredicted RBP13.34□□□□□ -0.27
CHD3-205ENST00000449744 RASSF5Q8WWW0 418 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 SLC38A2Q96QD8 506 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 TMEM43Q9BTV4 400 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 REG4Q9BYZ8 158 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 MOV10Q9HCE1 1003 aaKnown RBP13.34□□□□□ -0.27
CHD3-205ENST00000449744 MOKQ9UQ07 419 aa13.34□□□□□ -0.27
CHD3-205ENST00000449744 ARPC4-TTLL3A0A0A6YYG9 625 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 IGHV1-18A0A0C4DH31 117 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 CPSF4LA6NMK7 179 aaKnown RBP13.33□□□□□ -0.28
CHD3-205ENST00000449744 MS4A18H0YCH9 400 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 RPL36A-HNRNPH2H7BZ11 118 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 TRAF3IP2O43734 574 aaPredicted RBP13.33□□□□□ -0.28
CHD3-205ENST00000449744 CHP2O43745 196 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 CRYAAP02489 173 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 BGLAPP02818 100 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 PCSK6P29122 969 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 TUBA1BP68363 451 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 TUBA4AP68366 448 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 ARF1P84077 181 aaKnown RBP13.33□□□□□ -0.28
CHD3-205ENST00000449744 POU3F1Q03052 451 aaPredicted RBP13.33□□□□□ -0.28
CHD3-205ENST00000449744 SF3A3Q12874 501 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHD3-205ENST00000449744 MAPRE2Q15555 327 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 VMACQ2NL98 169 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 CEACAM16Q2WEN9 425 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 MS4A18Q3C1V0 323 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 ENTPD8Q5MY95 495 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 CARD17Q5XLA6 110 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 C11orf71Q6IPW1 123 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 NANOGP8Q6NSW7 305 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 TUBA1AQ71U36 451 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 GPR32P1Q8NGA4 272 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 OR6T1Q8NGN1 323 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 SLC41A3Q96GZ6 507 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 ECSITQ9BQ95 431 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 RHNO1Q9BSD3 238 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 NANOGQ9H9S0 305 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 CRLF2Q9HC73 371 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 GPR35Q9HC97 309 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 FGFR1OP2Q9NVK5 253 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 PMF1-BGLAPU3KQ54 211 aa13.33□□□□□ -0.28
CHD3-205ENST00000449744 HEATR1Q9H583 2144 aaKnown RBP13.33□□□□□ -0.28
CHD3-205ENST00000449744 ZNF726A6NNF4 738 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 M0R3G1 203 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 FBP2O00757 339 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 OR6A2O95222 327 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 MT-ATP6P00846 226 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 TP53P04637 393 aaPredicted RBP13.32□□□□□ -0.28
CHD3-205ENST00000449744 AHCYP23526 432 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 PUDPQ08623 228 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 KLF10Q13118 480 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 TTC33Q6PID6 262 aaPredicted RBP13.32□□□□□ -0.28
CHD3-205ENST00000449744 CLEC2AQ6UVW9 174 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 MAPK1IP1LQ8NDC0 245 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 LRRC58Q96CX6 371 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 MOGAT1Q96PD6 335 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 OR2M2Q96R28 347 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 EMC6Q9BV81 110 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 KATNB1Q9BVA0 655 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 B3GAT2Q9NPZ5 323 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 MRPL39Q9NYK5 338 aaKnown RBP13.32□□□□□ -0.28
CHD3-205ENST00000449744 NOX1Q9Y5S8 564 aa13.32□□□□□ -0.28
CHD3-205ENST00000449744 SLC35F4A4IF30 521 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 TRAPPC13A5PLN9 417 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 BBIP1A8MTZ0 92 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 LRRN3E7EW58 273 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 MRASO14807 208 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 SERPINI2O75830 405 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 HPRP00739 348 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 NPPAP01160 153 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 ADORA3P0DMS8 318 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms