RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
HMGB3-204ENST00000448905 DSPPQ9NZW4 1301 aa11.52□□□□□ -0.57
HMGB3-204ENST00000448905 SDHDO14521 159 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 ADRA2AP08913 450 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 CALCRP30988 508 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 BST1Q10588 318 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 NPRL3Q12980 569 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 CEACAM16Q2WEN9 425 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 TRMT5Q32P41 509 aaKnown RBP11.51□□□□□ -0.57
HMGB3-204ENST00000448905 C6orf10Q5SRN2 563 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 FAM69AQ5T7M9 428 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 LINGO2Q7L985 606 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 SERPINA11Q86U17 422 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 DNAJA4Q8WW22 397 aaPredicted RBP11.51□□□□□ -0.57
HMGB3-204ENST00000448905 SLC38A4Q969I6 547 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 TMEM19Q96HH6 336 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 SPATA5L1Q9BVQ7 753 aa11.51□□□□□ -0.57
HMGB3-204ENST00000448905 DENND2DQ9H6A0 471 aaPredicted RBP11.51□□□□□ -0.57
HMGB3-204ENST00000448905 CADP27708 2225 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 A0A0A6YYJ9 748 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 IGHV2OR16-5A0A0B4J2B6 119 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 ZNF726A6NNF4 738 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 ZNF99A8MXY4 864 aaPredicted RBP11.5□□□□□ -0.57
HMGB3-204ENST00000448905 B4DSR2 109 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 FTCDNL1E5RQL4 147 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 SYNGR3O43761 229 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 LILRA1O75019 489 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 ZNF432O94892 652 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 KITP10721 976 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 CD79AP11912 226 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 NQO1P15559 274 aaKnown RBP11.5□□□□□ -0.57
HMGB3-204ENST00000448905 NR4A1P22736 598 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 LSP1P33241 339 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 MVDP53602 400 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 POU3F1Q03052 451 aaPredicted RBP11.5□□□□□ -0.57
HMGB3-204ENST00000448905 MAPK11Q15759 364 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 GSG1Q2KHT4 349 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 GKAP1Q5VSY0 366 aaPredicted RBP11.5□□□□□ -0.57
HMGB3-204ENST00000448905 KRT73Q86Y46 540 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 UEVLDQ8IX04 471 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 ZCCHC24Q8N2G6 241 aaKnown RBP11.5□□□□□ -0.57
HMGB3-204ENST00000448905 MREGQ8N565 214 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 LSMEM1Q8N8F7 131 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 BBS10Q8TAM1 723 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 RNF217Q8TC41 542 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 MGARPQ8TDB4 240 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 KTI12Q96EK9 354 aaPredicted RBP11.5□□□□□ -0.57
HMGB3-204ENST00000448905 LRR1Q96L50 414 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 SNX18Q96RF0 628 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 EPYCQ99645 322 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 OCEL1Q9H607 264 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 BCL2L10Q9HD36 194 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 ZIM2Q9NZV7 527 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 REV1Q9UBZ9 1251 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 FBXL3Q9UKT7 428 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 POFUT2Q9Y2G5 429 aa11.5□□□□□ -0.57
HMGB3-204ENST00000448905 TRAV36DV7A0A075B6V5 113 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 TMEM129A0AVI4 362 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 M0R3G1 203 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 CLIC1O00299 241 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 UBDO15205 165 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 ENTPD5O75356 428 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 ETS2P15036 469 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 POLR2JP52435 117 aaKnown RBP11.49□□□□□ -0.57
HMGB3-204ENST00000448905 DVL1P1P54792 670 aaPredicted RBP11.49□□□□□ -0.57
HMGB3-204ENST00000448905 CDH15P55291 814 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 TMEM33P57088 247 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 SELENOVP59797 346 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 HOXC5Q00444 222 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 GALK2Q01415 458 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 EGR4Q05215 589 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 SNTB2Q13425 540 aaKnown RBP11.49□□□□□ -0.57
HMGB3-204ENST00000448905 RIN1Q13671 783 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 MPP2Q14168 576 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 RGNQ15493 299 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 SLC9B1Q4ZJI4 515 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 RPS26P11Q5JNZ5 115 aaPredicted RBP11.49□□□□□ -0.57
HMGB3-204ENST00000448905 CEP85LQ5SZL2 805 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 KRT80Q6KB66 452 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 ULK3Q6PHR2 472 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 C12orf54Q6X4T0 127 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 MDP1Q86V88 176 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 LSRQ86X29 649 aaPredicted RBP11.49□□□□□ -0.57
HMGB3-204ENST00000448905 MIER2Q8N344 545 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 ANKRD42Q8N9B4 389 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 TAAR8Q969N4 342 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 SLC47A1Q96FL8 570 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 OR2M2Q96R28 347 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 PTDSS2Q9BVG9 487 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 ASPNQ9BXN1 380 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 TMEM27Q9HBJ8 222 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 NOX3Q9HBY0 568 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 A4GALTQ9NPC4 353 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 SDR39U1Q9NRG7 319 aaPredicted RBP11.49□□□□□ -0.57
HMGB3-204ENST00000448905 GPR160Q9UJ42 338 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 SLC13A4Q9UKG4 626 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 CORINQ9Y5Q5 1042 aa11.49□□□□□ -0.57
HMGB3-204ENST00000448905 M0R082 166 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 M0R233 179 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 CELA3BP08861 270 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms