RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 MOKQ9UQ07 419 aa17.21■□□□□ 0.35
VCP-203ENST00000448530 FN1P02751 2386 aaKnown RBP17.21■□□□□ 0.34
VCP-203ENST00000448530 A0A096LPE4 126 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 A0A0B4J2E0 115 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 A0A1B0GX12 115 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 A0A1W2PPZ6 126 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 M0QX08 132 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 FZD7O75084 574 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 CRYAAP02489 173 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 TP53P04637 393 aaPredicted RBP17.2■□□□□ 0.34
VCP-203ENST00000448530 TROVE2P10155 538 aaKnown RBP eCLIP17.2■□□□□ 0.348e-9■■■■□ 22.1
VCP-203ENST00000448530 HOXB1P14653 301 aaPredicted RBP17.2■□□□□ 0.34
VCP-203ENST00000448530 APOBEC3AP31941 199 aaPredicted RBP17.2■□□□□ 0.34
VCP-203ENST00000448530 PCBP3P57721 371 aaKnown RBP17.2■□□□□ 0.34
VCP-203ENST00000448530 PMS2P3Q13401 168 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 INTS11Q5TA45 600 aaKnown RBP17.2■□□□□ 0.34
VCP-203ENST00000448530 LINGO2Q7L985 606 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 PATL1Q86TB9 770 aaKnown RBP17.2■□□□□ 0.34
VCP-203ENST00000448530 MAPK1IP1LQ8NDC0 245 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 MAGEE2Q8TD90 523 aaPredicted RBP17.2■□□□□ 0.34
VCP-203ENST00000448530 SLC26A7Q8TE54 656 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 B3GAT1Q9P2W7 334 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 PMF1-BGLAPU3KQ54 211 aa17.2■□□□□ 0.34
VCP-203ENST00000448530 ARPC4-TTLL3A0A0A6YYG9 625 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 LOC102725191A0A1B0GVB3 256 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 M0R3H8 397 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 FMO6PO60774 539 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 ZNF432O94892 652 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 OPN1SWP03999 348 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 C8BP07358 591 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 VIMP08670 466 aaKnown RBP17.19■□□□□ 0.34
VCP-203ENST00000448530 CDH12P55289 794 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 ARF1P84077 181 aaKnown RBP17.19■□□□□ 0.34
VCP-203ENST00000448530 CYLC2Q14093 348 aaPredicted RBP17.19■□□□□ 0.34
VCP-203ENST00000448530 SELPLGQ14242 412 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 ZNF613Q6PF04 617 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 CLEC2AQ6UVW9 174 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 SCAIQ8N9R8 606 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 ARHGDIGQ99819 225 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 TMEM43Q9BTV4 400 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 KATNB1Q9BVA0 655 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 TMEM120AQ9BXJ8 343 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 KAT8Q9H7Z6 458 aaKnown RBP17.19■□□□□ 0.34
VCP-203ENST00000448530 GPR35Q9HC97 309 aa17.19■□□□□ 0.34
VCP-203ENST00000448530 IGHV1-18A0A0C4DH31 117 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 INAFM1C9JVW0 142 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 RPL36A-HNRNPH2H7BZ11 118 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 SASH3O75995 380 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 PCGF2P35227 344 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 DSCR9P59020 149 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 TUBA1BP68363 451 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 TUBA4AP68366 448 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 DUSP7Q16829 419 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 MMEL1Q495T6 779 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 TUBA1AQ71U36 451 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 OR10A6Q8NH74 314 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 OR2M2Q96R28 347 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 SH3GL1Q99961 368 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 CRLF2Q9HC73 371 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 B3GAT2Q9NPZ5 323 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 NOX1Q9Y5S8 564 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 ALPK2Q86TB3 2170 aa17.18■□□□□ 0.34
VCP-203ENST00000448530 ABCA2Q9BZC7 2435 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 MS4A18H0YCH9 400 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 H7C417 338 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 TRAF3IP2O43734 574 aaPredicted RBP17.17■□□□□ 0.34
VCP-203ENST00000448530 TPST2O60704 377 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 BGLAPP02818 100 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 POU3F1Q03052 451 aaPredicted RBP17.17■□□□□ 0.34
VCP-203ENST00000448530 CEACAM16Q2WEN9 425 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 TRMT5Q32P41 509 aaKnown RBP17.17■□□□□ 0.34
VCP-203ENST00000448530 MS4A18Q3C1V0 323 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 C3orf36Q3SXR2 165 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 CARD17Q5XLA6 110 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 DNM1P46Q6ZS02 220 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 VANGL1Q8TAA9 524 aaPredicted RBP17.17■□□□□ 0.34
VCP-203ENST00000448530 RASSF5Q8WWW0 418 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 FBXO17Q96EF6 278 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 SLC41A3Q96GZ6 507 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 WFDC6Q9BQY6 131 aa17.17■□□□□ 0.34
VCP-203ENST00000448530 MRPL39Q9NYK5 338 aaKnown RBP17.17■□□□□ 0.34
VCP-203ENST00000448530 CR1P17927 2039 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 CPSF4LA6NMK7 179 aaKnown RBP17.16■□□□□ 0.34
VCP-203ENST00000448530 ZNF726A6NNF4 738 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 M0R3G1 203 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 CHP2O43745 196 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 OR6A2O95222 327 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 MT-ATP6P00846 226 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 AHCYP23526 432 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 CAPZA2P47755 286 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 ARFIP2P53365 341 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 PUDPQ08623 228 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 ENTPD8Q5MY95 495 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 SNX32Q86XE0 403 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 CCDC36Q8IYA8 594 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 TMEM123Q8N131 208 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 FAM169BQ8N8A8 192 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 GPR32P1Q8NGA4 272 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 OR6T1Q8NGN1 323 aa17.16■□□□□ 0.34
VCP-203ENST00000448530 HTRA1Q92743 480 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms