RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 CTDNEP1O95476 244 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 EMP1P54849 157 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 CXCR4P61073 352 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 FOXO4P98177 505 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 TPBGQ13641 420 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ARSIQ5FYB1 569 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 TCTE1Q5JU00 501 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 MANEAQ5SRI9 462 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 CDHR3Q6ZTQ4 885 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF595Q8IYB9 648 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 NUDT10Q8NFP7 164 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 DYNC2LI1Q8TCX1 351 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 NUDT11Q96G61 164 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 C3orf30Q96M34 536 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 CPA4Q9UI42 421 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 A0A1W2PQ09 198 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 OR6C76A6NM76 312 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 CAPNS1P04632 268 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 SMIM10L2AP0DMW4 78 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 SMIM10L2BP0DMW5 78 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 LILRB1Q8NHL6 650 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 SFXN2Q96NB2 322 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 SLCO1B1Q9Y6L6 691 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 PIAS3Q9Y6X2 628 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 MN1Q10571 1320 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ITSN1Q15811 1721 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 KIR2DS1A0A191URI9 304 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ST8SIA3O43173 380 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 KIR2DS4P43632 304 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 KIR2DS1Q14954 304 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF322Q6U7Q0 402 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF765Q7L2R6 523 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 FAM169BQ8N8A8 192 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 BOD1Q96IK1 185 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 FEVQ99581 238 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF337Q9Y3M9 751 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 AQP7O14520 342 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 PRICKLE3O43900 615 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 CNMDO75829 334 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 KCNQ1P51787 676 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 RPS21P63220 83 aaKnown RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 TNFRSF17Q02223 184 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 RPUSD3Q6P087 351 aaKnown RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 DLL4Q9NR61 685 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 INIPQ9NRY2 104 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 GALPQ9UBC7 116 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF629Q9UEG4 869 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 NEO1Q92859 1461 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 TRAV36DV7A0A075B6V5 113 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 SULT2B1O00204 365 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 GALR2O43603 387 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 MAFO75444 373 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 MNX1P50219 401 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF85Q03923 595 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 IKZF1Q13422 519 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 SHHQ15465 462 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 GPX7Q96SL4 187 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 UBIAD1Q9Y5Z9 338 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 OR5G3P0C626 314 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 TMEM183AQ8IXX5 376 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 OR10A7Q8NGE5 316 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 PHYHIPQ92561 330 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 RAB7BQ96AH8 199 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 KLHDC7BQ96G42 594 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 TIMD4Q96H15 378 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 C20orf24Q9BUV8 137 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 GSX2Q9BZM3 304 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ELOVL3Q9HB03 270 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 EBF1Q9UH73 591 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 TRIP12Q14669 1992 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 HMGXB3Q12766 1538 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 SAMD9Q5K651 1589 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 A0A1B0GTW7 788 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 AQP9O43315 295 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 AP1G1O43747 822 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 CRHP06850 196 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 PTAFRP25105 342 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 SULT1A1P50225 295 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 SOX10P56693 466 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 IAH1Q2TAA2 248 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 STUMQ69YW2 141 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ZFP41Q8N8Y5 198 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 PIGCQ92535 297 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 LYSMD1Q96S90 227 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ELF4Q99607 663 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 SEZ6LQ9BYH1 1024 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ASIC5Q9NY37 505 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 TIMM9Q9Y5J7 89 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ALPK2Q86TB3 2170 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 AQP7P3A6NL99 342 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 TIMM8AO60220 97 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 MAPKBP1O60336 1514 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 HIST1H1BP16401 226 aaKnown RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 BTF3P20290 206 aaKnown RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 B2MP61769 119 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 KLRB1Q12918 225 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 OR4A47Q6IF82 309 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 OR52L2PQ8NGH6 319 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 OR6K3Q8NGY3 331 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 DUS3LQ96G46 650 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms