RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 ARHGDIGQ99819 225 aa15.46■□□□□ 0.07
DDX56-207ENST00000448192 ASPNQ9BXN1 380 aa15.46■□□□□ 0.07
DDX56-207ENST00000448192 OBP2BQ9NPH6 170 aa15.46■□□□□ 0.07
DDX56-207ENST00000448192 CR1P17927 2039 aa15.46■□□□□ 0.07
DDX56-207ENST00000448192 IGHV1-18A0A0C4DH31 117 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 MS4A18H0YCH9 400 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 BGLAPP02818 100 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 SH3BGRP55822 239 aaPredicted RBP15.45■□□□□ 0.06
DDX56-207ENST00000448192 ARF1P84077 181 aaKnown RBP15.45■□□□□ 0.06
DDX56-207ENST00000448192 PMS2P3Q13401 168 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 MS4A18Q3C1V0 323 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 ZNF544Q6NX49 715 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 ANKRD16Q6P6B7 361 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 PATL1Q86TB9 770 aaKnown RBP15.45■□□□□ 0.06
DDX56-207ENST00000448192 SLC30A8Q8IWU4 369 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 GPR32P1Q8NGA4 272 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 VANGL1Q8TAA9 524 aaPredicted RBP15.45■□□□□ 0.06
DDX56-207ENST00000448192 SLC26A7Q8TE54 656 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 MOGAT1Q96PD6 335 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 SLC38A2Q96QD8 506 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 KCNS3Q9BQ31 491 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 REG4Q9BYZ8 158 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 FGFR1OP2Q9NVK5 253 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 CORINQ9Y5Q5 1042 aa15.45■□□□□ 0.06
DDX56-207ENST00000448192 LOC102725191A0A1B0GVB3 256 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 CPSF4LA6NMK7 179 aaKnown RBP15.44■□□□□ 0.06
DDX56-207ENST00000448192 LRRN3E7EW58 273 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 FBP2O00757 339 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 TRAF3IP2O43734 574 aaPredicted RBP15.44■□□□□ 0.06
DDX56-207ENST00000448192 AKAP8O43823 692 aaKnown RBP15.44■□□□□ 0.06
DDX56-207ENST00000448192 FMO6PO60774 539 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 HPRP00739 348 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 C8BP07358 591 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 HLA-DOBP13765 273 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 PCGF2P35227 344 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 ARFIP2P53365 341 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 NUDT6P53370 316 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 PPP2R2BQ00005 443 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 CYLC2Q14093 348 aaPredicted RBP15.44■□□□□ 0.06
DDX56-207ENST00000448192 RAB35Q15286 201 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 TRMT5Q32P41 509 aaKnown RBP15.44■□□□□ 0.06
DDX56-207ENST00000448192 MMEL1Q495T6 779 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 ENTPD8Q5MY95 495 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 SWT1Q5T5J6 900 aaKnown RBP15.44■□□□□ 0.06
DDX56-207ENST00000448192 INTS11Q5TA45 600 aaKnown RBP15.44■□□□□ 0.06
DDX56-207ENST00000448192 CARD17Q5XLA6 110 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 NANOGP8Q6NSW7 305 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 ZNF613Q6PF04 617 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 RBM45Q8IUH3 476 aaKnown RBP15.44■□□□□ 0.06
DDX56-207ENST00000448192 ADPRHL1Q8NDY3 354 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 PIK3C3Q8NEB9 887 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 OR6T1Q8NGN1 323 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 OR6S1Q8NH40 331 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 HTRA1Q92743 480 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 OR2M2Q96R28 347 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 TMEM43Q9BTV4 400 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 NANOGQ9H9S0 305 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 CRLF2Q9HC73 371 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 GPR35Q9HC97 309 aa15.44■□□□□ 0.06
DDX56-207ENST00000448192 FN1P02751 2386 aaKnown RBP15.43■□□□□ 0.06
DDX56-207ENST00000448192 ARPC4-TTLL3A0A0A6YYG9 625 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 INAFM1C9JVW0 142 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 RPL36A-HNRNPH2H7BZ11 118 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 M0R3G1 203 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 VIMP08670 466 aaKnown RBP15.43■□□□□ 0.06
DDX56-207ENST00000448192 APOBEC3AP31941 199 aaPredicted RBP15.43■□□□□ 0.06
DDX56-207ENST00000448192 POU3F1Q03052 451 aaPredicted RBP15.43■□□□□ 0.06
DDX56-207ENST00000448192 CHRNB3Q05901 458 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 NPTX1Q15818 432 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 VMACQ2NL98 169 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 CEACAM16Q2WEN9 425 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 TMEM123Q8N131 208 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 SCAIQ8N9R8 606 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 ANKK1Q8NFD2 765 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 MAGEE2Q8TD90 523 aaPredicted RBP15.43■□□□□ 0.06
DDX56-207ENST00000448192 TAMM41Q96BW9 452 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 ZNF837Q96EG3 531 aaPredicted RBP15.43■□□□□ 0.06
DDX56-207ENST00000448192 SLC41A3Q96GZ6 507 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 ZNF317Q96PQ6 595 aaPredicted RBP15.43■□□□□ 0.06
DDX56-207ENST00000448192 EMC6Q9BV81 110 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 NELFAQ9H3P2 528 aa15.43■□□□□ 0.06
DDX56-207ENST00000448192 MRPL39Q9NYK5 338 aaKnown RBP15.43■□□□□ 0.06
DDX56-207ENST00000448192 ALPK2Q86TB3 2170 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 CSPG4Q6UVK1 2322 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 CHP2O43745 196 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 SERPINI2O75830 405 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 CRYAAP02489 173 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 BMP4P12644 408 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 CD247P20963 164 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 AHCYP23526 432 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 PAX7P23759 505 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 GZMMP51124 257 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 PUDPQ08623 228 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 KLF10Q13118 480 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 RABL3Q5HYI8 236 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 DNM1P46Q6ZS02 220 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 OR4D11Q8NGI4 311 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 ADAMTS16Q8TE57 1224 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 LRRC58Q96CX6 371 aa15.42■□□□□ 0.06
DDX56-207ENST00000448192 FBXO17Q96EF6 278 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms