RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 FOXS1O43638 330 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 HRGP04196 525 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 PVRP15151 417 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 ANXA7P20073 488 aaKnown RBP17.42■□□□□ 0.38
SDCBP-204ENST00000447182 SLC25A1P53007 311 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 SCAND1P57086 179 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 RPS15P62841 145 aaKnown RBP17.42■□□□□ 0.38
SDCBP-204ENST00000447182 ERVK-25P63136 954 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 SLC16A9Q7RTY1 509 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 CSNK1A1LQ8N752 337 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 GALNT11Q8NCW6 608 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 REG4Q9BYZ8 158 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 TSPAN10Q9H1Z9 355 aaPredicted RBP17.42■□□□□ 0.38
SDCBP-204ENST00000447182 ING1Q9UK53 422 aaPredicted RBP17.42■□□□□ 0.38
SDCBP-204ENST00000447182 ATG2BQ96BY7 2078 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 TRBV5-5A0A0J9YX44 114 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 C2orf74A8MZ97 194 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 K7EQS6 105 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 UPK3AO75631 287 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 APBB3O95704 486 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 EGFP01133 1207 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 ACSM4P0C7M7 580 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 ADRA2CP18825 462 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 SEC13P55735 322 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 ALKBH1Q13686 389 aaKnown RBP17.42■□□□□ 0.38
SDCBP-204ENST00000447182 CBFBQ13951 182 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 LRRN1Q6UXK5 716 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 CHMP1BQ7LBR1 199 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 PRSS42Q7Z5A4 293 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 BPHLQ86WA6 291 aaPredicted RBP17.42■□□□□ 0.38
SDCBP-204ENST00000447182 MOKQ9UQ07 419 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 PSMD9O00233 223 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 GLSO94925 669 aaPredicted RBP17.41■□□□□ 0.38
SDCBP-204ENST00000447182 IGF2P01344 180 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 TNFRSF4P43489 277 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 FAM220AQ7Z4H9 259 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 LRRTM1Q86UE6 522 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 EXD3Q8N9H8 876 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 DNAAF1Q8NEP3 725 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 OR5AK2Q8NH90 309 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 MOSPD2Q8NHP6 518 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 PHOSPHO2Q8TCD6 241 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 G6PC3Q9BUM1 346 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 A0A1B0GVT2 93 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 H0Y8X5 98 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 APEHP13798 732 aaKnown RBP17.41■□□□□ 0.38
SDCBP-204ENST00000447182 ZP3P21754 424 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 GRPRP30550 384 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 CDKN2AP42771 156 aaKnown RBP17.41■□□□□ 0.38
SDCBP-204ENST00000447182 GXYLT1Q4G148 440 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 FAAP20Q6NZ36 180 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 LEG1Q6P5S2 330 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 RCBTB1Q8NDN9 531 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 C3orf49Q96BT1 292 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 CCNL2Q96S94 520 aaPredicted RBP17.41■□□□□ 0.38
SDCBP-204ENST00000447182 PPA2Q9H2U2 334 aa17.41■□□□□ 0.38
SDCBP-204ENST00000447182 WSB2Q9NYS7 404 aaPredicted RBP17.41■□□□□ 0.38
SDCBP-204ENST00000447182 MRM2Q9UI43 246 aaKnown RBP17.41■□□□□ 0.38
SDCBP-204ENST00000447182 ARHGEF17Q96PE2 2063 aaPredicted RBP17.41■□□□□ 0.38
SDCBP-204ENST00000447182 FANCMQ8IYD8 2048 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 A0A0J9YY10 115 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 MFSD2BA6NFX1 497 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 HMSDA8MTL9 139 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 TNFRSF10CO14798 259 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 RASGRP1O95267 797 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 ABHD16AO95870 558 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 CSTAP01040 98 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 PTHLHP12272 177 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 NPSR1Q6W5P4 371 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 LIPHQ8WWY8 451 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 FRRS1LQ9P0K9 344 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 KCNMB2Q9Y691 235 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 HEATR5AQ86XA9 2040 aa17.4■□□□□ 0.38
SDCBP-204ENST00000447182 TP53BP1Q12888 1972 aaPredicted RBP17.4■□□□□ 0.38
SDCBP-204ENST00000447182 FAM221BA6H8Z2 402 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 SERINC4A6NH21 518 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 RDH16O75452 317 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 B3GALNT1O75752 331 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 CSRP1P21291 193 aaKnown RBP17.39■□□□□ 0.38
SDCBP-204ENST00000447182 CALCRP30988 508 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 FAUP35544 74 aaKnown RBP17.39■□□□□ 0.38
SDCBP-204ENST00000447182 DLX5P56178 289 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 ITPRIPL2Q3MIP1 535 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 TMEM196Q5HYL7 178 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 LIPNQ5VXI9 398 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 B3GNTL1Q67FW5 361 aaPredicted RBP17.39■□□□□ 0.38
SDCBP-204ENST00000447182 OR5M10Q6IEU7 315 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 SLC36A1Q7Z2H8 476 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 FAM122BQ7Z309 247 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 GLB1L2Q8IW92 636 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 ZNF511Q8NB15 262 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 HMGB4Q8WW32 186 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 RIT1Q92963 219 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 PNPLA2Q96AD5 504 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 BMFQ96LC9 184 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 Q96M85 177 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 GABRG3Q99928 467 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 FBRSQ9HAH7 460 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 CD93Q9NPY3 652 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 SDHAF2Q9NX18 166 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms