RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 POU3F4P49335 361 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 LRFN5Q96NI6 719 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 ZNF701Q9NV72 531 aaPredicted RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 DCTN6O00399 190 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 GNRHRP30968 328 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 POLR2GP62487 172 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMG1-202ENST00000446231 RPUSD3Q6P087 351 aaKnown RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 OR4N5Q8IXE1 308 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 BAP18Q8IXM2 172 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 MUC20Q8N307 709 aaPredicted RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 PDXPQ96GD0 296 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 ZNF726A6NNF4 738 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 NDUFB6O95139 128 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 AK1P00568 194 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 SLC35G6P0C7Q6 338 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 ITGB8P26012 769 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 MCCD1P59942 119 aaPredicted RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 KIRREL1Q96J84 757 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 ZNF443Q9Y2A4 671 aaPredicted RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 RAB5AP20339 215 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 MC3RP41968 323 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 DHCR24Q15392 516 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 OR4C16Q8NGL9 310 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 POLMQ9NP87 494 aaPredicted RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 SLC22A6Q4U2R8 563 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 ATOH1Q92858 354 aaPredicted RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 KLK6Q92876 244 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 MED9Q9NWA0 146 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 UBE2MP61081 183 aaKnown RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 OR5M1Q8NGP8 315 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 CDS1Q92903 461 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 SLC25A19Q9HC21 320 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 ANKRD61A6NGH8 418 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 H0YIV9 168 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 OR7A5Q15622 319 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 LIMS3P0CW19 117 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 LIMS4P0CW20 117 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 ACHEP22303 614 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 ZNF461Q8TAF7 563 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 ZFPM2Q8WW38 1151 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 HOXB13Q92826 284 aaPredicted RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 SPACA7Q96KW9 195 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 DGAT2Q96PD7 388 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 VSX1Q9NZR4 365 aaPredicted RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 ZNF337Q9Y3M9 751 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 OR6C76A6NM76 312 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 AKR1A1P14550 325 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 TRA2BP62995 288 aaKnown RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 ALKBH1Q13686 389 aaKnown RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 LINC00469Q8N7U9 141 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 OR9A2Q8NGT5 310 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 C4AP0C0L4 1744 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 C4BP0C0L5 1744 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 IFT172Q9UG01 1749 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 COCHO43405 550 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 DIRAS3O95661 229 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 CTSLP07711 333 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 PRPS1P60891 318 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 TAF9Q16594 264 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 Q9N2J8 555 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 PCDHGA9Q9Y5G4 932 aaKnown RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 SCDO00767 359 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 PLGP00747 810 aaPredicted RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 NR2C1P13056 603 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 MRPS24Q96EL2 167 aaKnown RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 SLC25A31Q9H0C2 315 aa7.3□□□□□ -1.24
SMG1-202ENST00000446231 FGF20Q9NP95 211 aaPredicted RBP7.3□□□□□ -1.24
SMG1-202ENST00000446231 PJVKQ0ZLH3 352 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 SYPL1Q16563 259 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 Q5BKY6 102 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 ZNF852Q6ZMS4 543 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 PARGQ86W56 976 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 GABRG1Q8N1C3 465 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 ASB17Q8WXJ9 295 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 ABCD4O14678 606 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 OR4E1P0C645 316 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 SLC26A5P58743 744 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TMEM115Q12893 351 aaPredicted RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 DPY19L2P2Q6ZN68 376 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 OR52D1Q9H346 318 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 HPXP02790 462 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 GABRR2P28476 465 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 RIDAP52758 137 aaKnown RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 VWA2Q5GFL6 755 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 LRRTM1Q86UE6 522 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 BBS1Q8NFJ9 593 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 CXorf36Q9H7Y0 433 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 SLC2A10O95528 541 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 NFATC1O95644 943 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 MVDP53602 400 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 DVL1P1P54792 670 aaPredicted RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 TAS2R20P59543 309 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 CLINT1Q14677 625 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 MPEG1Q2M385 716 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 ZNF280BQ86YH2 543 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 NEIL2Q969S2 332 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 CHST2Q9Y4C5 530 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 KCPQ6ZWJ8 1503 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 OR6C68A6NDL8 312 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 CYB5BO43169 146 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms