RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 EFCAB5A4FU69 1503 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 USP47Q96K76 1375 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 MROH7-TTC4A0A0A0MT08 1334 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 CLSPNQ9HAW4 1339 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 ZMYM4Q5VZL5 1548 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 NSG1A0A0A6YYJ2 146 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR5B21A6NL26 309 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 LRRIQ3A6PVS8 624 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 C12orf71A8MTZ7 269 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 SERPINE3A8MV23 424 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 B4DXG7 233 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 GFYI3L273 518 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 SULT2B1O00204 365 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 AIM2O14862 343 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 POLR1CO15160 346 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 HUS1O60921 280 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 SH3BGRLO75368 114 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 CLPXO76031 633 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 TSPAN13O95857 204 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 CLTAP09496 248 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 H2AFZP0C0S5 128 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 UBTFL1P0CB47 393 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 UBCP0CG48 685 aaKnown RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 MYL2P10916 166 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 ZNF10P21506 573 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 IL12AP29459 219 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 DDOSTP39656 456 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 NAA10P41227 235 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 NSG1P42857 185 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 ALDH3B2P48448 385 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 MRPL19P49406 292 aaKnown RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 HNRNPA3P51991 378 aaKnown RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 KPNA2P52292 529 aaKnown RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 ARHGDIBP52566 201 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 EFNA3P52797 238 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 MRPS22P82650 360 aaKnown RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 PAX8Q06710 450 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 GNMTQ14749 295 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 C17orf58Q2M2W7 97 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 HSDL1Q3SXM5 330 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 XKR4Q5GH76 650 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR52E8Q6IFG1 317 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 SLC25A25Q6KCM7 469 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 REEP3Q6NUK4 255 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 STXBP4Q6ZWJ1 553 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 GTSCR1Q86UQ5 136 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 FAM58AQ8N1B3 248 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 CSNK1A1LQ8N752 337 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 ASCC1Q8N9N2 400 aaKnown RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 MNS1Q8NEH6 495 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR5T3Q8NGG3 340 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 ZNF596Q8TC21 504 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 CIDECQ96AQ7 238 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 MS4A14Q96JA4 679 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 OXGR1Q96P68 337 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 MCHR1Q99705 422 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 ATP5SQ99766 215 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 SLC29A1Q99808 456 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 RIOK1Q9BRS2 568 aaKnown RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR2AG1Q9H205 316 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 CAB39LQ9H9S4 337 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 THUMPD1Q9NXG2 353 aaKnown RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 STOX2Q9P2F5 926 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 CTSZQ9UBR2 303 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 RPL36Q9Y3U8 105 aaKnown RBP3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 SCAPERQ9BY12 1400 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 IQGAP2Q13576 1575 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 PLEKHH1Q9ULM0 1364 aa3.51□□□□□ -1.85
HMGB1P48-201ENST00000446155 LRRC7Q96NW7 1537 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 UGGT2Q9NYU1 1516 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 EP400Q96L91 3159 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 CDK12Q9NYV4 1490 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 IGLV4-3A0A075B6K6 122 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 KCNE1BA0A087WTH5 132 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 TRBV9A0A0B4J1U6 114 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 E9PLD3 99 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 SIRPB1O00241 398 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 GOSR2O14653 212 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 RRP8O43159 456 aaKnown RBP3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 HCN1O60741 890 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 SCRG1O75711 98 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 SEMA4FO95754 770 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 APOA1P02647 267 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 CT45A10P0DMU9 189 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 BCKDHBP21953 392 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 IDSP22304 550 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 PTGDSP41222 190 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 SLC1A2P43004 574 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 YAP1P46937 504 aaKnown RBP3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 TMED10P49755 219 aaKnown RBP3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 PRELPP51888 382 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 CCNG1P51959 295 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 MRPS11P82912 194 aaKnown RBP3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 RAD51Q06609 339 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 VWA2Q5GFL6 755 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR2G6Q5TZ20 316 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 GPRIN3Q6ZVF9 776 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 ASCL5Q7RTU5 278 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 SVOPLQ8N434 492 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 MS4A15Q8N5U1 240 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms