RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ROS1P08922 2347 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 AHCYP23526 432 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 PTAFRP25105 342 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 CD40P25942 277 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 KDELR2P33947 212 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 PTH2RP49190 550 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 CDH11P55287 796 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 PRPS1P60891 318 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 ROR2Q01974 943 aaKnown RBP12.92□□□□□ -0.34
USE1-202ENST00000445667 PGGHGQ32M88 737 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 LRRC23Q53EV4 343 aaPredicted RBP12.92□□□□□ -0.34
USE1-202ENST00000445667 CARD17Q5XLA6 110 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 HMBOX1Q6NT76 420 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 DEF8Q6ZN54 512 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 C17orf78Q8N4C9 275 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 SCAIQ8N9R8 606 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 ADPRHL1Q8NDY3 354 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 OR1K1Q8NGR3 316 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 TXNDC15Q96J42 360 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 OR2M2Q96R28 347 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 EMC6Q9BV81 110 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 PCDHAC1Q9H158 963 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 CXorf56Q9H5V9 222 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 DLL4Q9NR61 685 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 MRPL39Q9NYK5 338 aaKnown RBP12.92□□□□□ -0.34
USE1-202ENST00000445667 RCE1Q9Y256 329 aa12.92□□□□□ -0.34
USE1-202ENST00000445667 A0A096LPE4 126 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 A0A1W2PPZ6 126 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 OR6C65A6NJZ3 312 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 C11orf98E9PRG8 122 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 SERPINI2O75830 405 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 MT-ATP6P00846 226 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 IFNA14P01570 189 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 ADORA3P0DMS8 318 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 DRD4P21917 467 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 POU3F1Q03052 451 aaPredicted RBP12.91□□□□□ -0.34
USE1-202ENST00000445667 LIPEQ05469 1076 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 PUDPQ08623 228 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 TBRG1Q3YBR2 411 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 CYBRD1Q53TN4 286 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 PHYHD1Q5SRE7 291 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 SLC22A25Q6T423 547 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 KLHL24Q6TFL4 600 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 NHLRC1Q6VVB1 395 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 YTHDF3Q7Z739 585 aaKnown RBP12.91□□□□□ -0.34
USE1-202ENST00000445667 NKAIN4Q8IVV8 208 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 WDFY1Q8IWB7 410 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 GPR137CQ8N3F9 429 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 LRRC17Q8N6Y2 441 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 OR5J2Q8NH18 312 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 BCL2L2Q92843 193 aaPredicted RBP12.91□□□□□ -0.34
USE1-202ENST00000445667 ZNF837Q96EG3 531 aaPredicted RBP12.91□□□□□ -0.34
USE1-202ENST00000445667 TPD52L3Q96J77 140 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 MPP4Q96JB8 637 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 Q96MF0 132 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 PRSS27Q9BQR3 290 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 GSX2Q9BZM3 304 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 MYLK2Q9H1R3 596 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 GSX1Q9H4S2 264 aaPredicted RBP12.91□□□□□ -0.34
USE1-202ENST00000445667 EFCAB1Q9HAE3 211 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 GPR35Q9HC97 309 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 MED29Q9NX70 200 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 MGAT4BQ9UQ53 548 aa12.91□□□□□ -0.34
USE1-202ENST00000445667 MAGED1Q9Y5V3 778 aaPredicted RBP12.91□□□□□ -0.34
USE1-202ENST00000445667 SLC35F4A4IF30 521 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 E7EQL1 145 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 M0R3G1 203 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 NME4O00746 187 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 SNX3O60493 162 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 WNT11O96014 354 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 CD8AP01732 235 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 LSP1P33241 339 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 CDKN1AP38936 164 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 NUDT2P50583 147 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 SLC7A2P52569 658 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 TAS2R41P59536 307 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 RPS4XP62701 263 aaKnown RBP12.9□□□□□ -0.34
USE1-202ENST00000445667 TUBA1BP68363 451 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 TUBA4AP68366 448 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 ARF1P84077 181 aaKnown RBP12.9□□□□□ -0.34
USE1-202ENST00000445667 PIN1Q13526 163 aaPredicted RBP12.9□□□□□ -0.34
USE1-202ENST00000445667 ZNF74Q16587 644 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 C8orf82Q6P1X6 216 aaPredicted RBP12.9□□□□□ -0.34
USE1-202ENST00000445667 TUBA1AQ71U36 451 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 ARPINQ7Z6K5 226 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 CPLX4Q7Z7G2 160 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 TMEM123Q8N131 208 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 BOD1Q96IK1 185 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 HOPXQ9BPY8 73 aaPredicted RBP12.9□□□□□ -0.34
USE1-202ENST00000445667 ZNF426Q9BUY5 554 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 MEPEQ9NQ76 525 aaPredicted RBP12.9□□□□□ -0.34
USE1-202ENST00000445667 ZNF701Q9NV72 531 aaPredicted RBP12.9□□□□□ -0.34
USE1-202ENST00000445667 RIMS3Q9UJD0 308 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 POU2F3Q9UKI9 436 aa12.9□□□□□ -0.34
USE1-202ENST00000445667 VPS13CQ709C8 3753 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 GMNCA6NCL1 334 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 RPL36A-HNRNPH2H7BZ11 118 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 OVOL3O00110 214 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 AKAP8O43823 692 aaKnown RBP12.89□□□□□ -0.35
USE1-202ENST00000445667 OR6A2O95222 327 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms