RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 NFATC4Q14934 902 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 GFOD2Q3B7J2 385 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 DMKNQ6E0U4 476 aaPredicted RBP10.88□□□□□ -0.67
MSH6-204ENST00000445503 NHLRC1Q6VVB1 395 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 RCBTB1Q8NDN9 531 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 ZNF248Q8NDW4 579 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 OR2A5Q96R48 311 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 ZNF471Q9BX82 626 aaPredicted RBP10.88□□□□□ -0.67
MSH6-204ENST00000445503 MFFQ9GZY8 342 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 SYT4Q9H2B2 425 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 KCNE5Q9UJ90 142 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 ZMIZ1Q9ULJ6 1067 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 ZNF337Q9Y3M9 751 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 COL4A4P53420 1690 aaPredicted RBP10.88□□□□□ -0.67
MSH6-204ENST00000445503 C13orf42A0A1B0GVH6 325 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 SOX1O00570 391 aaPredicted RBP10.88□□□□□ -0.67
MSH6-204ENST00000445503 GPRIN2O60269 458 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 BRINP1O60477 761 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 ZFPL1O95159 310 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 APEHP13798 732 aaKnown RBP10.88□□□□□ -0.67
MSH6-204ENST00000445503 FOSL2P15408 326 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 PRSS3P35030 304 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 DIO1P49895 249 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 PPP1CAP62136 330 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 BTG2P78543 158 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 EFNB1P98172 346 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 ARHGAP40Q5TG30 622 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 PRAMEF17Q5VTA0 474 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 OR4C3Q8NH37 302 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 AHCYL2Q96HN2 611 aaKnown RBP10.88□□□□□ -0.67
MSH6-204ENST00000445503 C5orf34Q96MH7 638 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 OR6C68A6NDL8 312 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 GPANK1O95872 356 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 CFDP00746 253 aaPredicted RBP10.88□□□□□ -0.67
MSH6-204ENST00000445503 HLA-DQB1P01920 261 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 AMY2AP04746 511 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 IFNA6P05013 189 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 ACSM1Q08AH1 577 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 CBFBQ13951 182 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 AANATQ16613 207 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 KLHL26Q53HC5 615 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 VASNQ6EMK4 673 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 PARM1Q6UWI2 310 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 LRRN1Q6UXK5 716 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 OR6V1Q8N148 313 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 ZNF764Q96H86 408 aaPredicted RBP10.88□□□□□ -0.67
MSH6-204ENST00000445503 MENTQ9BUN1 341 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 MCCC2Q9HCC0 563 aa10.88□□□□□ -0.67
MSH6-204ENST00000445503 NAP1L6A6NFF2 107 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 F5H5P2 479 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 GABARAPH6UMI1 98 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 CDC40O60508 579 aaKnown RBP eCLIP10.87□□□□□ -0.679e-6■■■□□ 15.9
MSH6-204ENST00000445503 DLX5P56178 289 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 LRRC69Q6ZNQ3 347 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 OVCH1Q7RTY7 1134 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 GLB1L2Q8IW92 636 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 GPR148Q8TDV2 347 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 MICU1Q9BPX6 476 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 PLA2G2FQ9BZM2 168 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 PTTG3PQ9NZH4 202 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 MEIKINA0A087WXM9 373 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 C5orf51A6NDU8 294 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 C4orf47A7E2U8 309 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 HRKO00198 91 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 HNRNPA2B1P22626 353 aaKnown RBP10.87□□□□□ -0.67
MSH6-204ENST00000445503 TAS2R20P59543 309 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 SLC36A2Q495M3 483 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 SFRP5Q5T4F7 317 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 OLFML2AQ68BL7 652 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 OR7E24Q6IFN5 339 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 MCATQ8IVS2 390 aaKnown RBP10.87□□□□□ -0.67
MSH6-204ENST00000445503 BEST3Q8N1M1 668 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 SDR16C5Q8N3Y7 309 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 ARPC5LQ9BPX5 153 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 TAS2R3Q9NYW6 316 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 NUP50Q9UKX7 468 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 A0A0J9YY10 115 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 SERINC4A6NH21 518 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 EGFP01133 1207 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 ZNF823P16415 610 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 PRPS1P60891 318 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 RAP2BP61225 183 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 SMAD2Q15796 467 aaKnown RBP10.87□□□□□ -0.67
MSH6-204ENST00000445503 Q499Y3 187 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 NDUFAF7Q7L592 441 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 MRGPREQ86SM8 312 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 PDZD9Q8IXQ8 264 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 PLPP7Q8NBV4 271 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 OR51S1Q8NGJ8 323 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 ANGPTL6Q8NI99 470 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 ZPLD1Q8TCW7 415 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 RSC1A1Q92681 617 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 SEC22AQ96IW7 307 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 C10orf90Q96M02 699 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 NRSN2Q9GZP1 204 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 ELOVL3Q9HB03 270 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 HTTP42858 3142 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 A0A0B4J2E0 115 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 A0A1B0GX12 115 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms