RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 CDH2P19022 906 aaPredicted RBP13.47□□□□□ -0.25
CCNE1-203ENST00000444983 ADARB1P78563 741 aaKnown RBP13.47□□□□□ -0.25
CCNE1-203ENST00000444983 PDK3Q15120 406 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 ACSF3Q4G176 576 aaPredicted RBP13.47□□□□□ -0.25
CCNE1-203ENST00000444983 TMEM225Q6GV28 225 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 IZUMO2Q6UXV1 221 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 LNX2Q8N448 690 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 OR4Q3Q8NH05 313 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 HRASLS5Q96KN8 279 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 TSSK6Q9BXA6 273 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 CALHM2Q9HA72 323 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 SLC25A19Q9HC21 320 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 NDRG4Q9ULP0 352 aaKnown RBP13.47□□□□□ -0.25
CCNE1-203ENST00000444983 FAM215AQ9Y5M1 114 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 MED12LQ86YW9 2145 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 CD8B2A6NJW9 211 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 RNF13O43567 381 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 TRAF3IP2O43734 574 aaPredicted RBP13.47□□□□□ -0.25
CCNE1-203ENST00000444983 SLC19A2O60779 497 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 OR6A2O95222 327 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 IGHMP01871 453 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 CD14P08571 375 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 APEHP13798 732 aaKnown RBP13.47□□□□□ -0.25
CCNE1-203ENST00000444983 GABRA1P14867 456 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 AHCYP23526 432 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 SLC6A6P31641 620 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 PTGER4P35408 488 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 TAF11Q15544 211 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 CLEC12AQ5QGZ9 265 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 ZNF362Q5T0B9 420 aaPredicted RBP13.47□□□□□ -0.25
CCNE1-203ENST00000444983 NSUN5P2Q63ZY6 315 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 ACSM5Q6NUN0 579 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 SLC27A4Q6P1M0 643 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 CHMP1BQ7LBR1 199 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 DOLPP1Q86YN1 238 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 ZIC4Q8N9L1 334 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 ANKK1Q8NFD2 765 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 ABHD3Q8WU67 409 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 TFAP2CQ92754 450 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 PITX2Q99697 317 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 ADI1Q9BV57 179 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 RIBC2Q9H4K1 309 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 RNF122Q9H9V4 155 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 INIPQ9NRY2 104 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 ADAM18Q9Y3Q7 739 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 NOX1Q9Y5S8 564 aa13.47□□□□□ -0.25
CCNE1-203ENST00000444983 ARHGAP21Q5T5U3 1957 aa13.46□□□□□ -0.25
CCNE1-203ENST00000444983 SLC22A20A6NK97 555 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 C11orf98E9PRG8 122 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 H0YAE9 185 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 SYNGR4O95473 234 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 TXNDC12O95881 172 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 TPOP07202 933 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 HOXD4P09016 255 aaPredicted RBP13.46□□□□□ -0.26
CCNE1-203ENST00000444983 ABOP16442 354 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 POU1F1P28069 291 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 EFNB1P98172 346 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 GINS1Q14691 196 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 SLX4IPQ5VYV7 408 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 TMEM236Q5W0B7 351 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 ZNF585AQ6P3V2 769 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 SEM1Q6ZVN7 128 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 CREB3L2Q70SY1 520 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 CD163Q86VB7 1156 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 IGFN1Q86VF2 1251 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 CCDC71Q8IV32 467 aaPredicted RBP13.46□□□□□ -0.26
CCNE1-203ENST00000444983 OR2T33Q8NG76 320 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 OR9K2Q8NGE7 335 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 OR52L1Q8NGH7 329 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 TEX47Q8TBZ9 253 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 ZNF570Q96NI8 536 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 ZNF184Q99676 751 aaPredicted RBP13.46□□□□□ -0.26
CCNE1-203ENST00000444983 KATNB1Q9BVA0 655 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 TXNIPQ9H3M7 391 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 BCO1Q9HAY6 547 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 TBC1D23Q9NUY8 699 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 KLHL13Q9P2N7 655 aa13.46□□□□□ -0.26
CCNE1-203ENST00000444983 NBASA2RRP1 2371 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 LOC100130705A0A1B0GUX0 176 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 FIGNL2A6NMB9 653 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 ACVR2AP27037 513 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 NTF4P34130 210 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 CTXN1P60606 82 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 POU3F1Q03052 451 aaPredicted RBP13.45□□□□□ -0.26
CCNE1-203ENST00000444983 RNPS1Q15287 305 aaKnown RBP13.45□□□□□ -0.26
CCNE1-203ENST00000444983 SF3B4Q15427 424 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCNE1-203ENST00000444983 GUSBP1Q15486 140 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 ACKR1Q16570 336 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 ARMC4Q5T2S8 1044 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 C12orf73Q69YU5 71 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 USP51Q70EK9 711 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 GPAT4Q86UL3 456 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 WDFY1Q8IWB7 410 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 DHRSXQ8N5I4 330 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 IQCF1Q8N6M8 205 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 WNT2BQ93097 391 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 DOCK7Q96N67 2140 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 TSPAN32Q96QS1 320 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 TRIB1Q96RU8 372 aa13.45□□□□□ -0.26
CCNE1-203ENST00000444983 IFT27Q9BW83 186 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms