RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 PIK3C3Q8NEB9 887 aa16.49■□□□□ 0.23
ATPAF2-201ENST00000444058 OR1K1Q8NGR3 316 aa16.49■□□□□ 0.23
ATPAF2-201ENST00000444058 PROX1Q92786 737 aa16.49■□□□□ 0.23
ATPAF2-201ENST00000444058 TRMT61AQ96FX7 289 aaKnown RBP16.49■□□□□ 0.23
ATPAF2-201ENST00000444058 ALKBH3Q96Q83 286 aaPredicted RBP16.49■□□□□ 0.23
ATPAF2-201ENST00000444058 BDH2Q9BUT1 245 aa16.49■□□□□ 0.23
ATPAF2-201ENST00000444058 ZNF426Q9BUY5 554 aa16.49■□□□□ 0.23
ATPAF2-201ENST00000444058 USF3Q68DE3 2245 aa16.49■□□□□ 0.23
ATPAF2-201ENST00000444058 MS4A18H0YCH9 400 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 TRAF3IP2O43734 574 aaPredicted RBP16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 UPK3AO75631 287 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 INHBBP09529 407 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 NQO1P15559 274 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 ATP5J2P56134 94 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 SLC25A3Q00325 362 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 SF3A3Q12874 501 aaKnown RBP eCLIP16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 MS4A18Q3C1V0 323 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 HMBOX1Q6NT76 420 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 ANKRD16Q6P6B7 361 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 SLC22A25Q6T423 547 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 LINGO2Q7L985 606 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 ARPINQ7Z6K5 226 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 PXKQ7Z7A4 578 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 UEVLDQ8IX04 471 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 PIAS4Q8N2W9 510 aaPredicted RBP16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 FAM169BQ8N8A8 192 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 OR4D11Q8NGI4 311 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 BCL2L2Q92843 193 aaPredicted RBP16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 Q96MF0 132 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 MOGAT1Q96PD6 335 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 TRAF4Q9BUZ4 470 aaPredicted RBP16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 POLR2J2Q9GZM3 115 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 POLR2J3Q9H1A7 115 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 NOX1Q9Y5S8 564 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 VPS13CQ709C8 3753 aa16.48■□□□□ 0.23
ATPAF2-201ENST00000444058 ARPC4-TTLL3A0A0A6YYG9 625 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 CPSF4LA6NMK7 179 aaKnown RBP16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 FAM171A2A8MVW0 826 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 FAM220BPB1ANY3 271 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 M0R1B8 84 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 LYPD3O95274 346 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 THY1P04216 161 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 CDH2P19022 906 aaPredicted RBP16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 ROR2Q01974 943 aaKnown RBP16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 PUDPQ08623 228 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 PMS2P3Q13401 168 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 TBRG1Q3YBR2 411 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 HIKESHIQ53FT3 197 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 AGAP6Q5VW22 663 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 ZNF544Q6NX49 715 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 NHLRC1Q6VVB1 395 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 RBM45Q8IUH3 476 aaKnown RBP16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 TMEM123Q8N131 208 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 VANGL1Q8TAA9 524 aaPredicted RBP16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 GTPBP3Q969Y2 492 aaKnown RBP16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 COX4I2Q96KJ9 171 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 LRR1Q96L50 414 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 OR2M2Q96R28 347 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 DHRS9Q9BPW9 319 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 ALG2Q9H553 416 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 FKRPQ9H9S5 495 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 ARMCX1Q9P291 453 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 SH3GLB1Q9Y371 365 aa16.47■□□□□ 0.23
ATPAF2-201ENST00000444058 E7EQL1 145 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 PLPP3O14495 311 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 HPRP00739 348 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 CD8AP01732 235 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 TTKP33981 857 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 LGALS3BPQ08380 585 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 ZNF74Q16587 644 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 C3orf36Q3SXR2 165 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 TTC33Q6PID6 262 aaPredicted RBP16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 WDR88Q6ZMY6 472 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 GPR137CQ8N3F9 429 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 C10orf53Q8N6V4 93 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 OR2T12Q8NG77 320 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 OR5J2Q8NH18 312 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 C1QTNF6Q9BXI9 259 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 POU2F3Q9UKI9 436 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 SLC7A7Q9UM01 511 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 PLCE1Q9P212 2302 aa16.46■□□□□ 0.23
ATPAF2-201ENST00000444058 CBLP22681 906 aa16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 KDELR2P33947 212 aa16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 UBE2NP61088 152 aaKnown RBP16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 IL1RL1Q01638 556 aa16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 POU3F1Q03052 451 aaPredicted RBP16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 TSPYL5Q86VY4 417 aaPredicted RBP16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 CCDC36Q8IYA8 594 aa16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 RCN3Q96D15 328 aa16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 HOPXQ9BPY8 73 aaPredicted RBP16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 NELFAQ9H3P2 528 aa16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 CRLF2Q9HC73 371 aa16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 GPR35Q9HC97 309 aa16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 CRNNQ9UBG3 495 aaPredicted RBP16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 ZNF229Q9UJW7 825 aa16.45■□□□□ 0.22
ATPAF2-201ENST00000444058 NF1P21359 2839 aa16.44■□□□□ 0.22
ATPAF2-201ENST00000444058 ELOVL7A1L3X0 281 aa16.44■□□□□ 0.22
ATPAF2-201ENST00000444058 IGF2P01344 180 aa16.44■□□□□ 0.22
ATPAF2-201ENST00000444058 THRBP10828 461 aa16.44■□□□□ 0.22
ATPAF2-201ENST00000444058 COX4I1P13073 169 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms