RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 ZNF275Q9NSD4 429 aaPredicted RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 C20orf141Q9NUB4 165 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 TOR4AQ9NXH8 423 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 GPR83Q9NYM4 423 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 PPP4R1LQ9P1A2 415 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 ABI3Q9P2A4 366 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 KLHL13Q9P2N7 655 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 GRHPRQ9UBQ7 328 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 ADAM30Q9UKF2 790 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 SSR3Q9UNL2 185 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 RCE1Q9Y256 329 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 RASD1Q9Y272 281 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 CARD8Q9Y2G2 431 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 TMED7Q9Y3B3 224 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 SF3B6Q9Y3B4 125 aaKnown RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 PTRH2Q9Y3E5 179 aaKnown RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 LOXL2Q9Y4K0 774 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 CHCHD2Q9Y6H1 151 aaPredicted RBP2.56□□□□□ -2
LINC00393-201ENST00000443621 CPAMD8Q8IZJ3 1885 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 GON4LQ3T8J9 2241 aa2.56□□□□□ -2
LINC00393-201ENST00000443621 A0A0A6YYH2 397 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 A0A1W2PPW3 197 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 DAPL1A0PJW8 107 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 PRSS37A4D1T9 235 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 MEGF11A6BM72 1044 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 CCDC182A6NF36 153 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 A6NJ64 397 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 METTL15A6NJ78 407 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 LIPT2A6NK58 231 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 AQP7P3A6NL99 342 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 TMEM212A6NML5 194 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 DHRS7CA6NNS2 312 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 C12orf71A8MTZ7 269 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 ZNF879B4DU55 563 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 C9orf172C9J069 976 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 MCIDASD6RGH6 385 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 LOC110117498-PIK3R3F6TDL0 507 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 KLRC4-KLRK1H3BQV0 150 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 GPR171O14626 319 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 LRRTM2O43300 516 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 FRS3O43559 492 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 OR2J2O76002 312 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 FRYLO94915 3013 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 ALX3O95076 343 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 SOX14O95416 240 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 CNOT4O95628 575 aaKnown RBP2.55□□□□□ -2
LINC00393-201ENST00000443621 CH25HO95992 272 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 ACTL6AO96019 429 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 P04436 131 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 HPNP05981 417 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 LCKP06239 509 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 NAT2P11245 290 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 SPTBP11277 2137 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 CCL4P13236 92 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 VCANP13611 3396 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 HIST1H1CP16403 213 aaKnown RBP2.55□□□□□ -2
LINC00393-201ENST00000443621 SPI1P17947 270 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 TCN2P20062 427 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 ALOX5APP20292 161 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 CNR1P21554 472 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 FUT4P22083 530 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 APEX1P27695 318 aaKnown RBP2.55□□□□□ -2
LINC00393-201ENST00000443621 ITPKBP27987 946 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 GTF2E2P29084 291 aaKnown RBP2.55□□□□□ -2
LINC00393-201ENST00000443621 PCSK6P29122 969 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 PTGS2P35354 604 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 RPL4P36578 427 aaKnown RBP2.55□□□□□ -2
LINC00393-201ENST00000443621 GNALP38405 381 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 LIPAP38571 399 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 CD96P40200 585 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 PEX19P40855 299 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 EIF2S3P41091 472 aaKnown RBP2.55□□□□□ -2
LINC00393-201ENST00000443621 ETV5P41161 510 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 CASRP41180 1078 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 NR4A2P43354 598 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 GPR4P46093 362 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 CYB561P49447 251 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 ETV1P50549 477 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 MMP16P51512 607 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 GBX2P52951 348 aaPredicted RBP2.55□□□□□ -2
LINC00393-201ENST00000443621 SLC16A1P53985 500 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 CTXN1P60606 82 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 RAC3P60763 192 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 RPL18Q07020 188 aaKnown RBP2.55□□□□□ -2
LINC00393-201ENST00000443621 AQP6Q13520 282 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 DNASE1L3Q13609 305 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 CRMP1Q14194 572 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 TOMM20Q15388 145 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 SF3B4Q15427 424 aaKnown RBP eCLIP2.55□□□□□ -2
LINC00393-201ENST00000443621 ZNF181Q2M3W8 571 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 PLPPR5Q32ZL2 321 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 SPANXN2Q5MJ10 180 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 ACER2Q5QJU3 275 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 C10orf128Q5T292 105 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 ZNF684Q5T5D7 378 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 LINC01590Q5TEZ4 76 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 PRAMEF17Q5VTA0 474 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 C1orf189Q5VU69 101 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 ZNF318Q5VUA4 2279 aa2.55□□□□□ -2
LINC00393-201ENST00000443621 TMEM236Q5W0B7 351 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms