RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 CHCHD6Q9BRQ6 235 aa16.91■□□□□ 0.3
POLR1E-203ENST00000442009 IRF2BPLQ9H1B7 796 aa16.91■□□□□ 0.3
POLR1E-203ENST00000442009 INIPQ9NRY2 104 aa16.91■□□□□ 0.3
POLR1E-203ENST00000442009 PMF1-BGLAPU3KQ54 211 aa16.91■□□□□ 0.3
POLR1E-203ENST00000442009 FREM2Q5SZK8 3169 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 MED13Q9UHV7 2174 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 A0A087WZY1 265 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 MS4A18H0YCH9 400 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 IGHMP01871 453 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 TFP02787 698 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 EIF1P41567 113 aaKnown RBP16.9■□□□□ 0.3
POLR1E-203ENST00000442009 SLC16A1P53985 500 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 TUBA1BP68363 451 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 ZNF85Q03923 595 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 KRR1Q13601 381 aaKnown RBP16.9■□□□□ 0.3
POLR1E-203ENST00000442009 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.9■□□□□ 0.31e-6■■■■■ 28.8
POLR1E-203ENST00000442009 MS4A18Q3C1V0 323 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 LIPKQ5VXJ0 399 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 TUBA1AQ71U36 451 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 RAB43Q86YS6 212 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 POMGNT2Q8NAT1 580 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 ZNF519Q8TB69 540 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 ZBTB8AQ96BR9 441 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 ZHX1-C8orf76Q96EF9 292 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 FANCFQ9NPI8 374 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 SPIN1Q9Y657 262 aaPredicted RBP16.9■□□□□ 0.3
POLR1E-203ENST00000442009 MED12Q93074 2177 aa16.9■□□□□ 0.3
POLR1E-203ENST00000442009 LIPT2A6NK58 231 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 CLPXO76031 633 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 GLCEO94923 617 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 SNX4O95219 450 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 INHBBP09529 407 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 LIFP15018 202 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 CD82P27701 267 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 TIGD3Q6B0B8 471 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 OR51L1Q8NGJ5 315 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 SPRYD4Q8WW59 207 aaPredicted RBP16.89■□□□□ 0.29
POLR1E-203ENST00000442009 ZMYND19Q96E35 227 aaPredicted RBP16.89■□□□□ 0.29
POLR1E-203ENST00000442009 TMEM41AQ96HV5 264 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 SNX18Q96RF0 628 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 ALG8Q9BVK2 526 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 DCSTAMPQ9H295 470 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 TXNIPQ9H3M7 391 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 RNF167Q9H6Y7 350 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 ISG20L2Q9H9L3 353 aaKnown RBP16.89■□□□□ 0.29
POLR1E-203ENST00000442009 LOC100506127A0A0U1RQW1 187 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 DAPL1A0PJW8 107 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 TRIM3O75382 744 aaPredicted RBP16.89■□□□□ 0.29
POLR1E-203ENST00000442009 MRPL3P09001 348 aaKnown RBP16.89■□□□□ 0.29
POLR1E-203ENST00000442009 PSMA1P25786 263 aaKnown RBP16.89■□□□□ 0.29
POLR1E-203ENST00000442009 RPS3AP61247 264 aaKnown RBP16.89■□□□□ 0.29
POLR1E-203ENST00000442009 RPL27P61353 136 aaKnown RBP16.89■□□□□ 0.29
POLR1E-203ENST00000442009 ACTC1P68032 377 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 ACTA1P68133 377 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 GABREP78334 506 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 BDH1Q02338 343 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 ACKR1Q16570 336 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 LCN1P1Q5VSP4 162 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 USP43Q70EL4 1123 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 H1FNTQ75WM6 255 aaPredicted RBP16.89■□□□□ 0.29
POLR1E-203ENST00000442009 JAZF1Q86VZ6 243 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 GPALPP1Q8IXQ4 340 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 GTPBP8Q8N3Z3 284 aaPredicted RBP16.89■□□□□ 0.29
POLR1E-203ENST00000442009 OR10H4Q8NGA5 316 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 TRMT61AQ96FX7 289 aaKnown RBP16.89■□□□□ 0.29
POLR1E-203ENST00000442009 SLIRPQ9GZT3 109 aaKnown RBP16.89■□□□□ 0.29
POLR1E-203ENST00000442009 SERINC1Q9NRX5 453 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 STUB1Q9UNE7 303 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 MOKQ9UQ07 419 aa16.89■□□□□ 0.29
POLR1E-203ENST00000442009 CEP250Q9BV73 2442 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 FREM3P0C091 2139 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 A0A1W2PQL4 384 aaPredicted RBP16.88■□□□□ 0.29
POLR1E-203ENST00000442009 C11orf98E9PRG8 122 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 DCTN6O00399 190 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 ZIC3O60481 467 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 OR2T7P0C7T2 308 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 FKBP2P26885 142 aaKnown RBP16.88■□□□□ 0.29
POLR1E-203ENST00000442009 DCAF10Q5QP82 559 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 C3orf33Q6P1S2 294 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 CD200R1LQ6Q8B3 271 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 NHLRC1Q6VVB1 395 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 TMPRSS11AQ6ZMR5 421 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 LINC00299Q6ZSB3 139 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 GHDCQ8N2G8 530 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 OR2T27Q8NH04 317 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 SMAP2Q8WU79 429 aaPredicted RBP16.88■□□□□ 0.29
POLR1E-203ENST00000442009 GNRHR2Q96P88 292 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 IP6K3Q96PC2 410 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 CNN2Q99439 309 aaKnown RBP16.88■□□□□ 0.29
POLR1E-203ENST00000442009 RPRD1BQ9NQG5 326 aaKnown RBP16.88■□□□□ 0.29
POLR1E-203ENST00000442009 BABAM2Q9NXR7 383 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 ZMIZ1Q9ULJ6 1067 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 NOX1Q9Y5S8 564 aa16.88■□□□□ 0.29
POLR1E-203ENST00000442009 FAM186AA6NE01 2351 aa16.87■□□□□ 0.29
POLR1E-203ENST00000442009 NPIPB13A6NJU9 1138 aa16.87■□□□□ 0.29
POLR1E-203ENST00000442009 NPIPB4C9JG80 1138 aa16.87■□□□□ 0.29
POLR1E-203ENST00000442009 RNF13O43567 381 aa16.87■□□□□ 0.29
POLR1E-203ENST00000442009 DSCR4P56555 118 aaPredicted RBP16.87■□□□□ 0.29
POLR1E-203ENST00000442009 MYBPHQ13203 477 aa16.87■□□□□ 0.29
POLR1E-203ENST00000442009 OR7A5Q15622 319 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms